Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00919 ATGGCAGCTTCTCGAGTGGCTGGAGGATTAGCGCAATCTTCCTCAAGTTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCCAAGGCTACCGTTAAATCTCACTTGGGCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGAACTGGCCATTCAAATTTGGGTCCAGTTTCTGGGGACACAAATGGTGTCTTTAATAGTGTGGCAAATTCGGGACCAAGTGTTGGGGCAAGTTCTTTGGTTACAGATGCAAATTCTGCACTTTCAGGTGGGCCTCACTTGCAGAGAAGTCCAAGTATGAATGCAGAATCATACATGCGATTACCTACATCGCCTATGTCTTTTACATCAAATAACATGAGTATCTCAGGTGCATCACTCATTGATGCATCTTCTGTACTGCAGCACAATTCTCAGCAGGATCATAATGCTTCCCAGTTGCATACCCAGGCACAGGCCCGACAAGTTTCTTCAGGTGATGCATCACTGTCGAATTCACAAACCGTTCAAGCTTCACTCCCCATGGGTGCACGTGTCTCGGGATCTCTCATGACAGATCCCAATAGTTATTCTCAGTCACAGAAGAAGCCACGTTTGGATATTAAGCAGGATGATTTTCTGCAACAGCAGGTTTTACAGCAGCTACTGCAGAGACAAGATTCCATGCAATTGCAAGGTCGTAATACGCCTCAGCTGCAAGCAGCATTGTTTCAGCAGCAACAGAGACTACGGCAGCAACAACAAATTTTTCAGTCTTTACCTCCTTTGCAGAGAGCTCATATGCAGCAGCAGCAGCAGATACAGTTGAGGCAGCAGCTTCAGCAACAGGCAATACAGCCTGTAAATGCTATGAAGCGGCCTCATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTACCTATACCATCAGCGTCAAAGGCCTGCTGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACTGAGTATTATTCTCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAACAATGTTGGACATCATGCACTTGGTGTTTTCCCTCAAGCAGCTATGGATGCATGGCAGTGTGACATTTGTGGATCAAAATCTGGACGGGGATTTGAGGCTTCCTTTGAAGTCCTTCCTAGACTCAATGAGATCAAATTTGGCAGTGGAGTCATTGATGAGCTATTGTTCTTAGATATGCCACGGGAATTCAGATATTCATCTGGAATTATGATGTTAGAATATGGAAAAGCGGTTCAAGAGAGTGTGTATGAGCAACTTCGTGTGGTTCGTGAGGGACAGCTTCGTATCATATTTACTCATGAACTGAAGATATTGGCATGGGAATTTTGTGCAAGACGACATGAAGAACTTCTACCTCGTAGACTGGTTGCACCTCAGGTGAATCAATTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGAACTGATGGGGCTTCTCAGCAGGATTTACAAGCAAATAGCAATATGGTTTTGACAGCTGGGCAGCAGCTTGCCAAGAGTCTGGAGTTGCAGTCGCTGAATGATTTGGGGTTCTCTAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTTGTCAATAGCATGAAAGATTTGATCGATTTCTGTAGGGAGCAGAAAACTGGACCAGTTGAGGGTTTGAAAAGTTATCCTCAGCACGCCACAGCGAAGCTGCAGATGCAAAAAATGCAAGAGATTGAACAGGTTGCTAATGCTCAGGGTCTGCCAACGGATCGTAACACCCTTGGTAGAATGGTCTCCCTGCATCCTGGGCTGAACAACCAAATGAATAGCCAAAATCAACTAGCCAGCAGAGGAACTTTGAGCGGTTCAGCACAAGCTGCGTTGGCATTGTCTAACTACCAGAATCTCCTAATGAGACAGAACTCAATGAATTCAACGAGTTCACACGCACTCCAGCAGGAGACATCATCGTCATTCAATACTTCAAACCAGAGTCCTTCATCAAGCTTTCATGGGACAACCGCTATAACATCGGCACCAATGCAGAACTTGCCCAGCAGTGGTCTTTCAAGTCCTAATTTGCCTCAACAACAATCTCAAGTTCAACACCAACTGCATCAGCGGCCGAACACCAACAACTTACTCATGCAGAGTACCCAAGGTAACAGTAACAATAATCAGGCTATGCAACATCAGATGATCCAGCAGCTACTCCAGATATCTAATAACAGTGGGGGAGGGCAACCGCAACAGCAACCACAACCGCAGCAGCAACTGCTTTCTGGATCCAACACAAAAGTAAGTGTTGCTGGAACTTATACAGGCTATGGAGCCAACAACTCCTCTGTGACGGCTGCAGGCACAGCCAATGCATCTTGTAGTAACACGCCGGCCCCAAGCCGAAGTAACAGTTTCAAAAGTGCTTCAACTGGTGATGTATCAGCAGCCGGTGCTCGTAGCGGCAGTGGGTTCAACCAAAGAAGTGCAGATTTGCCACAAAATCTTCAATTGGATGATGATATAATCCAGGACATAGCCCATGATTTTACGGATAATGGGTTCTTTAACAATGATCTTGACGATAATATGTGCCTTATCTGGAAAGGTTAA 2598 45.38 MAASRVAGGLAQSSSSSGIFFQGDGQSKATVKSHLGSSYGNSSNSIPGTGHSNLGPVSGDTNGVFNSVANSGPSVGASSLVTDANSALSGGPHLQRSPSMNAESYMRLPTSPMSFTSNNMSISGASLIDASSVLQHNSQQDHNASQLHTQAQARQVSSGDASLSNSQTVQASLPMGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQVLQQLLQRQDSMQLQGRNTPQLQAALFQQQQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQAIQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGTDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQKTGPVEGLKSYPQHATAKLQMQKMQEIEQVANAQGLPTDRNTLGRMVSLHPGLNNQMNSQNQLASRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQQETSSSFNTSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTNNLLMQSTQGNSNNNQAMQHQMIQQLLQISNNSGGGQPQQQPQPQQQLLSGSNTKVSVAGTYTGYGANNSSVTAAGTANASCSNTPAPSRSNSFKSASTGDVSAAGARSGSGFNQRSADLPQNLQLDDDIIQDIAHDFTDNGFFNNDLDDNMCLIWKG* 866
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11983160 11990525 - Chy9G166350.1 Chy09g00919 233816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00919 865 MobiDBLite consensus disorder prediction 737 761 - -
Chy09g00919 865 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 155 857 - -
Chy09g00919 865 PANTHER LIM DOMAIN-BINDING PROTEIN 5 149 IPR029005 -
Chy09g00919 865 MobiDBLite consensus disorder prediction 182 196 - -
Chy09g00919 865 MobiDBLite consensus disorder prediction 135 175 - -
Chy09g00919 865 MobiDBLite consensus disorder prediction 8 59 - -
Chy09g00919 865 MobiDBLite consensus disorder prediction 135 198 - -
Chy09g00919 865 MobiDBLite consensus disorder prediction 783 826 - -
Chy09g00919 865 MobiDBLite consensus disorder prediction 640 702 - -
Chy09g00919 865 PANTHER LIM DOMAIN-BINDING PROTEIN 155 857 IPR029005 -
Chy09g00919 865 Pfam LIM-domain binding protein 296 556 IPR029005 -
Chy09g00919 865 MobiDBLite consensus disorder prediction 1 59 - -
Chy09g00919 865 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 149 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00918 Chy09g00919 CCT
Chy06g00918 Chy09g00919 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00834 Chy-Chr3:11531633 Chy09g00919 Chy-Chr9:11983160 3.30E-116 dispersed
Chy06g00918 Chy-Chr6:6757636 Chy09g00919 Chy-Chr9:11983160 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00919 - - csv:101207744 1479.54