Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00925 ATGACCCCTGATAGAGCTCTCCACGATCAGCTCTCTCTTGTTTTCTCCCCTCAATGTGGGGACCAATGGAAGAATTTGAAGTCAATTTGTAAAGGATCTATTGTGGAGATTAAAGATTTTGTTTTTACCTCTGTTTTCAATACACTTTCTAACTTGATTTTATCGATGGATTTGCTTGATTTTGTTGGTGATGGGTTTAACGGGATTAAAGGGCCTTTCAAGAAAATGATGAATTTGGGTTTGACTCCAAATTTGGCTGATTTTTATCCATTGTTGAGAAGGTTTGATCTTCAAGGTCTTAGAAAGAAAGCTGCCATTTACATGAATGAAGTTCATTCTTTGTGGGGGATTCTTATTAAAGAAAGAAGAGAAATTCATTGTAAAAAAGGTTCAGCTTCAAGTGATTTCTTGGATGTCTTGATTCAAAGTGGATTTAGTGATCAACAAATCAATGCCTTGATTGTTGAATTGCTATCTGCAGGCACAGACACTACTACAACAACAGTGGAATGGGCAATGTCAGAGATTCTAAAAGACAAAGACATACTAAACAAAGTAAGAGAGGAAATAAAGAAGGTAACAAAGGAAAACCCCATTGATGAATCCAACATTTCTAAGCTTCAATATCTATGGAGTTGTGTGAAAGAAACCCTAAGACTACACCCACCTGCCCCATTTCTTCTTCCACGTTTAGCTCCAACGGACTGTGAAGTTATGGGATACTCAATCCCAAAAGACAGTATGATTTTTGTCAATGTTTGGGGAATTGGGAGAGACCCTTCAATTTGGGAAGATTCTCAAACGTTCAATCCTCAAAGATTTGATGTTGGTTGTGGTAATAATGTGGATTTTAAAGGGTATGATTATAGGTATTTGCCATTTGGTGGAGGAAGAAGAATTTGCCCTGGTCTGCCAATGGCCATTGTGCAAGTGCCTTTGATTTTAGCCACATTAATTCACAACTTTGAATGGTCACTTCCTAATGGTGAAGATTTATCAAAGTTGGATTTGAATGGAAGGCTTGGTGTAACATTGCAAAAGTATGAAACTCTTAAACTTATTCCTAAAAGGAGGGTTATTTGA 1083 37.12 MTPDRALHDQLSLVFSPQCGDQWKNLKSICKGSIVEIKDFVFTSVFNTLSNLILSMDLLDFVGDGFNGIKGPFKKMMNLGLTPNLADFYPLLRRFDLQGLRKKAAIYMNEVHSLWGILIKERREIHCKKGSASSDFLDVLIQSGFSDQQINALIVELLSAGTDTTTTTVEWAMSEILKDKDILNKVREEIKKVTKENPIDESNISKLQYLWSCVKETLRLHPPAPFLLPRLAPTDCEVMGYSIPKDSMIFVNVWGIGRDPSIWEDSQTFNPQRFDVGCGNNVDFKGYDYRYLPFGGGRRICPGLPMAIVQVPLILATLIHNFEWSLPNGEDLSKLDLNGRLGVTLQKYETLKLIPKRRVI* 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12052701 12054908 - Chy9G166410.1 Chy09g00925 233822

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00925 360 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS E-class P450 group I signature 149 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS E-class P450 group I signature 301 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS E-class P450 group I signature 252 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS E-class P450 group I signature 291 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS E-class P450 group I signature 169 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PANTHER CYTOCHROME P450 71B11-RELATED 31 356 - -
Chy09g00925 360 SUPERFAMILY Cytochrome P450 22 358 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 Pfam Cytochrome P450 33 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 294 303 IPR017972 GO:0005506|GO:0016705
Chy09g00925 360 Gene3D Cytochrome P450 2 359 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS P450 superfamily signature 160 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS P450 superfamily signature 212 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PRINTS P450 superfamily signature 292 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g00925 360 PANTHER (S)-N-METHYLCOCLAURINE 3'-HYDROXYLASE ISOZYME 1-LIKE 31 356 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00925 - - - csv:116403724 659.833
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00925 Chy-Chr9:12052701 Chy04g00920 Chy-Chr4:13125866 2.93E-79 dispersed
Chy09g00925 Chy-Chr9:12052701 Chy09g00926 Chy-Chr9:12058384 7.16E-16 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g606 . Blo15g00156 . . Bpe03g00135 Bpe07g00949 Bma10g01211 . . . . . . . . . . . . . . . . . Cla01g00545 . . . . . . . Cone5ag0838 . . . Csa05g00580 Chy09g00925 . Blo07g00422 Blo09g00081 Bda06g00671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g00589 . . Cme09g01454
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy09g00925 Chy_Chr09 FPKM 1.56568 2.571455 11.146405 0.0 1.977961 2.309493 1.769352 5.1655 0.0 5.056004