Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g00965 ATGTCCGAATCATCTCCCTCCGATCATGATCCCTCTCCCTCCGCCGCCAAGCTCCGCAAGATCCCTCCCATCCCTGTTCGCCGCGATTCCAAATCCAACGCCGGAGACTCCGATTCCGATTCCGATTCCGATTCCGATCTTGAACATGACCTTACCGAGGATCTTCCTCTTCAACCTGACGATTCCTCCATCATTATGGCATCATCTCTTGGATTGAATCACATTCGGACGAGGTCTGCTCCTTTGCCGCTACGGACATCTGCTGTTGGCACGCCTTCCAATTTGGGAGATAATTCCAGAAATAATGTCACCGAGGGGACCAATTCTGAGCCAAAAGTTTCCTCCACTGAACTAGGAAAAAGAGTTCTGTGGAGTCAATCGAAATCGTTCAGACATCCGCCATGTGTGAATCATGATTTTGAGGGTAATCATGTAGCCTTTGGAAAGGAAATTCAGTCTCCACGGTTTCGTGCCATATTGCGTGTTACTAGTGGAAGAAGGAAGAGAACCCCGGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAGGGAGTTCGCCCTTTTCCACTTTGGAAACCTCGAACACTTGGACATTTGGAAGAAATCATGGTGGCTATCAGAGAAAAATTTGACAGATTGAAGGATGATGTTAATAACGAACTGGGCATTTTTGCTGGCGATCTCGTAGATTTACTTGACAAGACAGACCACTCTCAGCCTGAACTAAGAAAGGGTTTAGAGGACTTATTGGTGATGTCCCGGAAATGTGCAACAATATCACCTGCAGATTTCTGGGCGGAAGGTGAAGGGATTGTCCAAAGTCTAGATGACCGGCGGCAGGAGCTGTCATTAGGGGTTCTTAAGCAAGCCCACACCCGTATTCTCTTCATCCTGACACGATGTACTCGGCTGATTCAGTTCCGAAAGGAGAGTGGTTATGAAGATGACCACATTTTGGGTTTTCATCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATTAGGCAGCTCGAACAACTTAACTTTGGTGATCCATTGACTGTGAAAGAAGAAATTGGGCAGCAGCTAAGTTTGGTTGGTAAGGATCAAGACAGTCTCATTGTGAAGCAAGATTTAGGTCAAAATTTTAACAATAGTGCTGGAAATGTTGAGCTGAACTCTGCTTTAAGTGTTGATTCATCTACAAGTATGAGGATGGCATCCTGGAAAAAGCTACCGTCAGCAGCTGAGAAGAACCGGAAAGACGCTGACTCTACTGGAACACCTTCCAGGGATAAACTTGAACTGTTGCATGAAAATGAAGCTAAGACTGGGAGCAACAACCAATTAGATACCCCATCTAATCATGTTGCGCATTTGGAAGCACCTCCTAAAGAACAAAAACTGTCTTGGGGAATATGGGGTTATCATCAAAATGCCACTTTTGAGAATTTGATGATTTGTCGGATTTGTGAGGTTGAGATTCCGACCATTCATGTTGAGGAACATTCTCGAATATGTACAATTGCTGATAGGTGTGATTTGAAAGGTTTAACTGTGAATGAGCGCCTCGACCGGGTTGCTACAGCTCTTGAAAAGATACTAGAGTCTTGGACGCCTAAAAGTACACCAAGAAGTAGTGATACTTCCTGCGGAAATTTTGATACCATTAAGGTTTCTACATCAAGTATGCAAGAAGAGGTTTTTGTTGAGCTGTCATCCAGAGTAATAAATTCGTCATGTCGAAACTCTGAAGATCTGCTTGATTCCCTTCCTGTTACTGGCAGCAACTCCTTTATAGAAAGTCAGGATATTTTTCCTGATTCATCATTCAATCGGCAATTTATTTTCACACCAGATTACAGTACGAAATCAACTTCAGCTGGAACTCTTACACCAAGATCACCTCTTTTAACCCCCAGATCCAGCCAGATTGAATTGTTGTTGCATGGGCGAAAAGCAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGATATTGTTCGTTCCATTGCAAATGTTAACGACTCTGGTTATGGTGCATTGGAGTCTATGCTCGATCGATTAGAGGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCCCTTGTTGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTATTGCAGGAAAAATATGTACATCTTTGTGGACAAATTGAAGATGATAAATTAGAATCTTCACATGGCTTGGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTCCGTAGTTTGCGTGCAAGTCCTGTCAACAAATGCTCAAAAGATCGTACATCTATTGCAGATTTTGAAATAATTAAGCCAATTAGTAGAGGGGCATATGGCCGAGTTTTTCTTGCCAGAAAAAGGGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGCAATATTCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAGTACTTAAATGGTGGTGATATTTATTCATTACTGAGAAACCTAGGGTGCTTAGACGAAGATATGGCTCGTATTTATATCGCTGAAATTGTTCTAGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGACTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAGTGGACCTGATTCACTTGGAGACAATGGACCAGCATCTTTGCCAAAAAGAGAACACAGACAAAAGCAGTCAGTAGTCGGTACTCCAGATTATTTGGCTCCTGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGAATACCGCCGTTCAATGAAGAGAATCCACAGCAAATTTTTGATAATATCATTAACAGAGACATACCATGGCCCAGGGTGCCTGGCGAGATGAGTTATGAAGCCCATGATTTGATTGACAAATTGCTGACTGAAAATGCAGTTCAAAGACTGGGAGCTACTGGAGCCAGAGAGGTGAAAGAGCATCCTTTCTTCAAAGATATTAACTGGGAAACCCTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGCCGTTATATATGGAATCCAGAAGATGAGGATTTTAATGGTGGAAGTGATTTTGATGATCATGATTTGACTGATACTTGCAGCAGTAGTTCATTTAGTAACCTACAAGATGAAGACGGAGACGAATGTGGTAGTTTGACTGACTTCTGTACATCAGCCCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAACTGGCTTCCATCAATTACGATTTGGTTGTGAAGAGCAGTCAAAATTCACCAGATGTATCAAAACCATCCGTTCCTTGA 3534 42.13 MSESSPSDHDPSPSAAKLRKIPPIPVRRDSKSNAGDSDSDSDSDSDLEHDLTEDLPLQPDDSSIIMASSLGLNHIRTRSAPLPLRTSAVGTPSNLGDNSRNNVTEGTNSEPKVSSTELGKRVLWSQSKSFRHPPCVNHDFEGNHVAFGKEIQSPRFRAILRVTSGRRKRTPDIKSFSHELNSKGVRPFPLWKPRTLGHLEEIMVAIREKFDRLKDDVNNELGIFAGDLVDLLDKTDHSQPELRKGLEDLLVMSRKCATISPADFWAEGEGIVQSLDDRRQELSLGVLKQAHTRILFILTRCTRLIQFRKESGYEDDHILGFHQLSDLGIYPEKIRQLEQLNFGDPLTVKEEIGQQLSLVGKDQDSLIVKQDLGQNFNNSAGNVELNSALSVDSSTSMRMASWKKLPSAAEKNRKDADSTGTPSRDKLELLHENEAKTGSNNQLDTPSNHVAHLEAPPKEQKLSWGIWGYHQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLDRVATALEKILESWTPKSTPRSSDTSCGNFDTIKVSTSSMQEEVFVELSSRVINSSCRNSEDLLDSLPVTGSNSFIESQDIFPDSSFNRQFIFTPDYSTKSTSAGTLTPRSPLLTPRSSQIELLLHGRKAISELENYQQIYKLLDIVRSIANVNDSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHLCGQIEDDKLESSHGLVDEESSVEDDTVRSLRASPVNKCSKDRTSIADFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGPDSLGDNGPASLPKREHRQKQSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGIPPFNEENPQQIFDNIINRDIPWPRVPGEMSYEAHDLIDKLLTENAVQRLGATGAREVKEHPFFKDINWETLARQKAMFIPSAEPQDTSYFMSRYIWNPEDEDFNGGSDFDDHDLTDTCSSSSFSNLQDEDGDECGSLTDFCTSALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSVP* 1178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12338370 12349878 - Chy9G166810.1 Chy09g00965 233862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g00965 1177 MobiDBLite consensus disorder prediction 407 426 - -
Chy09g00965 1177 Gene3D Transferase(Phosphotransferase) domain 1 852 1072 - -
Chy09g00965 1177 MobiDBLite consensus disorder prediction 83 118 - -
Chy09g00965 1177 MobiDBLite consensus disorder prediction 84 118 - -
Chy09g00965 1177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672|GO:0006468
Chy09g00965 1177 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 13 1177 - -
Chy09g00965 1177 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 1177 - -
Chy09g00965 1177 ProSiteProfiles AGC-kinase C-terminal domain profile. 1055 1157 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy09g00965 1177 ProSiteProfiles Protein kinase domain profile. 768 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00965 1177 MobiDBLite consensus disorder prediction 402 426 - -
Chy09g00965 1177 SMART serkin_6 768 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g00965 1177 Gene3D Phosphorylase Kinase; domain 1 767 1081 - -
Chy09g00965 1177 MobiDBLite consensus disorder prediction 22 38 - -
Chy09g00965 1177 MobiDBLite consensus disorder prediction 928 954 - -
Chy09g00965 1177 MobiDBLite consensus disorder prediction 1 61 - -
Chy09g00965 1177 SUPERFAMILY Protein kinase-like (PK-like) 767 1085 IPR011009 -
Chy09g00965 1177 CDD STKc_MAST_like 774 1059 - -
Chy09g00965 1177 Pfam Protein kinase domain 768 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02540 Chy-Chr2:28692266 Chy09g00965 Chy-Chr9:12338370 2.60E-70 dispersed
Chy09g00965 Chy-Chr9:12338370 Chy12g01587 Chy-Chr12:19391094 0 dispersed
Chy10g01269 Chy-Chr10:17226124 Chy09g00965 Chy-Chr9:12338370 3.76E-56 dispersed
Chy09g00965 Chy-Chr9:12338370 Chy07g00261 Chy-Chr7:2059432 8.94E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71473 PF00069 Pkinase 7.80E-64 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g00965 - - csv:101210442 2258.41