Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01014 ATGGCTTTCTCAAAAGCACTGCCCTGTATTCTCCTTATCACCATGCTGTTCACCGTCCGGCCAACCACGGCGCAGTTGTGCCCGTCGTTCTACGACACCACATGTCCCAACCTATCCTCCATTGTAGAAGATGTAGTGAGACAAGCTCTCCAAACCGATGCCCGAGCAGGCGCCAAACTCATTCGCTTTCATTTCCACGATTGTTTCGTCAATGGATGTGATGGGTCGGTTCTACTTGAAGATTCAGTCGCAGATGGTATAGATAGTGAACAAAACGCACCCGGAAACGAAGGAATCCAAGGCCAAAATATTGTCGCTGACATCAAAACTGCTGTTGAAAATGCATGTCCAAACGTTGTCTCCTGTGCTGACATCTTAGCCATTGCATCTAATTCAGCCGTCGTCTTGGCAGGAGGAAGAGGTTGGGAGGTTCAACTAGGAAGAAGAGATAGCAGAATAGCAAATAGATCAGGAGCTGTGAGTAATCTTCCAAGTCCTTTTGAACCTCTTGCAAATCTTACTGTCAAGTTTGCCAACGTTGGTCTTAATTCTACTGATCTTGTCTCTTTATCTGGGGCGCACACGTTTGGTAAATCAAGATGTCGATTCTTCCAAGGACGATTGAGCAACTTTAGTGGAACGGCAATGCCTGATCCGAGTCTAGACCCAATCTATAGAGACATCCTTTTGGAGGCATGTCCTCAAGGCGGAGACAACAACCGGGTGAACCTAGACCCAACAACTCCCAACGAATTCGACAACAACTATTTCACCAATCTCCAAGACAACCGTGGGCTTCTTACAAGCGACCAAGTACTGTTCTCCCCTCCCGGCACTGCAACCACCGTTGACGTGGACCGCTTCGCAGCAAGCCAAGACGTGTTCTTTGATGCTTTTGGAGCTTCCATGATCAAGATGGGGAATATTATGCCATCGACTACAACTGATGGGGAGATACGTTTAACTTGTTCTAGGATTAATCCTTTGCCTACTCTTGCTGATATGTAA 1008 47.02 MAFSKALPCILLITMLFTVRPTTAQLCPSFYDTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVADGIDSEQNAPGNEGIQGQNIVADIKTAVENACPNVVSCADILAIASNSAVVLAGGRGWEVQLGRRDSRIANRSGAVSNLPSPFEPLANLTVKFANVGLNSTDLVSLSGAHTFGKSRCRFFQGRLSNFSGTAMPDPSLDPIYRDILLEACPQGGDNNRVNLDPTTPNEFDNNYFTNLQDNRGLLTSDQVLFSPPGTATTVDVDRFAASQDVFFDAFGASMIKMGNIMPSTTTDGEIRLTCSRINPLPTLADM* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12729051 12730976 - Chy9G167300.1 Chy09g01014 233911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01014 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Chy09g01014 335 Gene3D - 30 327 - -
Chy09g01014 335 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PANTHER PEROXIDASE 58 17 327 - -
Chy09g01014 335 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PANTHER PEROXIDASE 72-RELATED 17 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Chy09g01014 335 Gene3D Peroxidase, domain 2 164 306 - -
Chy09g01014 335 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy09g01014 335 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00074 Chy-Chr5:531245 Chy09g01014 Chy-Chr9:12729051 2.60E-134 dispersed
Chy05g00080 Chy-Chr5:573216 Chy09g01014 Chy-Chr9:12729051 1.75E-135 dispersed
Chy05g00081 Chy-Chr5:579739 Chy09g01014 Chy-Chr9:12729051 7.66E-144 dispersed
Chy09g01014 Chy-Chr9:12729051 Chy05g00082 Chy-Chr5:583836 2.69E-95 dispersed
Chy09g01014 Chy-Chr9:12729051 Chy07g01260 Chy-Chr7:17305002 3.35E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01014 K00430 - csv:101215530 649.047