Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01029 ATGCTCAAACTAATCCTTCCCCTTGCTTCCGCCACCCTTTTCCTTCTCCTCCTAATCACCATCTTCCTTCTTCGCCTTAAGCTCTCTAAAAATCACGACATCGAGAAATCCTCCACCACCCACAACAACACCACCAAAACCGACCACACCCCCCCTCCGCCCCCGCCCGAGCTCACCACTTTTGAGGGCGGCGAAGATTTGACCATCGACGAGATTTTAGAGGCTCCCGGAGAAGTGATCGGAAAATCCCACTACGGTACTCTCTACAAGGCTGTCTTACAAACCACCCAAACCATCCGGCTACTTAGATTTCTCCGGCCGGCCGCTGCCGGATGTGACGACCAGTACGACCTCGTTCGGCTCCTGAGTTCGGTTCGGCATCGGAATTTGGTTCCGTTGCTGGGATTCTACGCCGGTGGGAGGGGTGAGAAGCTTTTGGTTCATCCGTTCTACGAACATGGGAATTTGGCGGAGTTCATTAGAGATAGGGAATCAAAAAACGGGGAGGTGATTTGCAAAATCGCCATCGGAATCGCAAGAGCTCTACATCATCTTCACAATGGATTACAAAAACCAATCCCCCATGGAAATCTCAACTCCAAGAACGTTCTTCTCGATCAAAATCTCCACCCCCACGTCTCCGATTTCGGCCTCCATCTCTTCCTCAACTCCCCCGCAACTCGACAAATGCTCCAACTTTCCGCCTCCTCTGGCTACAAGGCCCCAGAACTTATCAATATGACCGATGCTGATGAACGCACCGACGTCTACAGCTACGGAAAGATCTTGCTCGAGTTGCTGATGTCCTCCAAAGAGCCGACGGTTCGAAACCCGGCTGCCACCGCTGATTCCGGCGTCTCTGAAGAGCGGATTCTCCAATGCCTTGTTCAGATGGGAGAGGATTGTTGTCGTTCTTCGCCCAATCTTCGGCCGGATTTCAGGGAAGTGATTGCTAAGATTGAAGAAATCGGAAGAATTGAGATGAATCAACTGATGAATTGA 1002 51.3 MLKLILPLASATLFLLLLITIFLLRLKLSKNHDIEKSSTTHNNTTKTDHTPPPPPPELTTFEGGEDLTIDEILEAPGEVIGKSHYGTLYKAVLQTTQTIRLLRFLRPAAAGCDDQYDLVRLLSSVRHRNLVPLLGFYAGGRGEKLLVHPFYEHGNLAEFIRDRESKNGEVICKIAIGIARALHHLHNGLQKPIPHGNLNSKNVLLDQNLHPHVSDFGLHLFLNSPATRQMLQLSASSGYKAPELINMTDADERTDVYSYGKILLELLMSSKEPTVRNPAATADSGVSEERILQCLVQMGEDCCRSSPNLRPDFREVIAKIEEIGRIEMNQLMN* 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12821454 12823932 + Chy9G167450.1 Chy09g01029 233926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01029 333 SUPERFAMILY Protein kinase-like (PK-like) 77 323 IPR011009 -
Chy09g01029 333 ProSiteProfiles Protein kinase domain profile. 74 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01029 333 Gene3D Transferase(Phosphotransferase) domain 1 68 333 - -
Chy09g01029 333 Pfam Protein tyrosine and serine/threonine kinase 78 319 IPR001245 GO:0004672|GO:0006468
Chy09g01029 333 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 284 324 - -
Chy09g01029 333 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 278 - -
Chy09g01029 333 MobiDBLite consensus disorder prediction 36 56 - -
Chy09g01029 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 284 324 - -
Chy09g01029 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01029 Chy-Chr9:12821454 Chy01g01352 Chy-Chr1:17965266 1.19E-52 dispersed
Chy07g01379 Chy-Chr7:18431905 Chy09g01029 Chy-Chr9:12821454 5.16E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71478 PF07714 PK_Tyr_Ser-Thr 4.00E-28 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01029 - - csv:101217438 549.666