Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01031 ATGGAGGTGACGGCAGATCCAGCCAAGAGAAATCATATGTTGCTGCCTTCCCCTTCTCCAGTTGTAGCCGTTGCTATCAGTGGGAAGAAAAACAGTAAATATATAATTAGGTGGGCATTGGAAAAGTTTCTACCTGAGGGCACCATTGATTTCAAGTTGCTGCACTTCATCCCAAGGATTACCAGTGTCCCAACTCCAATGGGAAATGCAATTCCAATTTCACAAGTTCGTGAGGACGTCGCTGCGGCTTATAGGAAAGAAATCTGGTGGCAGACAAGTGAAAAACTTCTTCCATTTAAGAAGATGTTTGCTCAGCGAAAGGTTCATCTTGATGTTGTAACTCTTGAAGCAGATGATATAGCAGGTGCAATAATAGAAGAGGTTACAAAGTGTTCAATCAACAAGCTTGTTATAGGGGTTTCATCACAGGGATTATTCTCAAGGAAGCTAAGCGGTCTATCCTCAAGAATATCAGCCCTTGCACCTAGATATTGTACGTTGTATGCTATTTCAAAAGGAAAACTAGCCTCAATACGACCGCCTGATATGGATATGAACGTGAGCATTAGAGATGATGCAAGTGAAGAAAGTTCTGCAAGTAGCTACTCGAGCTATACATCTAGCTCCCTTACAGATGGCAGTTCAAGCTTAACTAGCTCCTACTCTCATTTCCCTTCTCCTTCCCCTTCCCTACCATTACAACGATTTCAAGCTCTTTCAACCATTAATCAACCTCTTCTTACGAAAAAACCTAGCCCCATTAAAGCCGACCATTCTAGATGTCAATCCGTTGACATTGAGAATCAGGTGGATGGCGTTCCTTCTTCTTCCTATGTTTCAGACGGCATACAAACATTGAGTCGAGTCTCTAGTAGTAAAAGCTCGCCAACAGAGAACAAGTCTTGGAATTCTGATGAAGCTTCATCTTCCGGCGCGTTTAATGATTATTCCTCATGTGAAAGTCAGGTGGATGTCAGCTTTGAGCTTGAAAAGTTGAAAATCGAACTAAGACATGCGAGAGGAATGTTTGCAATTGCCCAACGAGAGACAATTGATGCCTCTCGAGAGCTGAACCATCTAAATAAGCAACGGTCGGAGGAAGCTAGGAAACTCGAAGAGATCAACAACAAAGCGGTGGCCGCCAAAGAATTTGCAAGGGAAGAGAGAGTGAAACATGAAGCTTTGAGAAGAGAAGCAAAGTATGTAAAAGAACGCGCTGAAAGAGAGGGCATCTACAGGAAGGAAGCAGAGATAAAAGCTCTTCAAAATGCCAAAGAGAAGGGAAAGCATGAGAATGCTCTTCAAGGACCTCTGCAGCAATATCAACATTTTCAGTGGGAAGATATTGTTTCTGCCACATCATCTTTCTCTGAGGATCTTAAGATTGGAATGGGAGCACATGGAACAGTTTATAAGTGCAGTTTGCATCATACAACCGTAGCAGTGAAGGCTCTTCATTCTAGAGATAGTCACAAACAGATGCAATTGCTTCAGGAGCTAGAAGTCTTGAGCAGAATCCATCATCCCCATCTACTACTACTCCTCGGTGCTTGTCCGGATAAGAATTGTCTGGTTTATGAGTACATGGAAAATGGTAGCTTGGAGGATAGGTTATACCGCAGAGGCAATACACCTGCAATCCCATGGTATGAGAGGTTTCGAATTGCTTGGGAAATAGCCTCTGCTCTTGTCTTTCTTCACAGCTCAAAACCAAAATCAATAATCCACCGTGATCTTAAACCCGCAAACATCTTACTTGACCAAAACCTTGTGAGTAAAATCGGCGACGTCGGTCTTTCTACAGTGTTTAATTCAGATCCTTCAATGTCTACTGCATTCATGAATAGCGGACCAGTTGGGACTCTCTGTTACATAGATCCTGAGTATCAACGAACTGGATTAATCTCACCTAAGTCTGATGTCTATGCTTTTGGAATGGTGATCCTGCAGTTACTAACTGCAAAACCAGCAGTAGCACTAACCCATGTGGTGGAAACAGCCATTGATAACAGCACTTTAATTAAGGTTCTGGATATAGAGGCTGGGTATTGGCCCCTCGAAGAGACGTATGAATTGGCAAGATTAGGACTTCACTGTGCCGAGATGCAACGTAAAGATAGGCCTGACTTGAAGAACCAAGTACTTCCCTTGTTGATGACACTGAAAAAAGTTGCTGATGAGGCTCGAAATTTGGCCTCCAAAGTTCCAGCTGCAATTCCTAACCATTTCATCTGTCCAATACTTCAGGATGTGATGAATGACCCTTGTGTTGCGGCGGATGGATACACATACGATCGTCAGGCAATAGAGAAATGGCTTCAGAAGAACGATAACTCACCGATGACAAAGTTGCCGTTGCCAGATAAGAATTTAATACCAAACTATAGTCTTCTCTCTGCAATTGTTGAGTGGAACTCCAAAAGAAGTTAA 2430 42.8 MEVTADPAKRNHMLLPSPSPVVAVAISGKKNSKYIIRWALEKFLPEGTIDFKLLHFIPRITSVPTPMGNAIPISQVREDVAAAYRKEIWWQTSEKLLPFKKMFAQRKVHLDVVTLEADDIAGAIIEEVTKCSINKLVIGVSSQGLFSRKLSGLSSRISALAPRYCTLYAISKGKLASIRPPDMDMNVSIRDDASEESSASSYSSYTSSSLTDGSSSLTSSYSHFPSPSPSLPLQRFQALSTINQPLLTKKPSPIKADHSRCQSVDIENQVDGVPSSSYVSDGIQTLSRVSSSKSSPTENKSWNSDEASSSGAFNDYSSCESQVDVSFELEKLKIELRHARGMFAIAQRETIDASRELNHLNKQRSEEARKLEEINNKAVAAKEFAREERVKHEALRREAKYVKERAEREGIYRKEAEIKALQNAKEKGKHENALQGPLQQYQHFQWEDIVSATSSFSEDLKIGMGAHGTVYKCSLHHTTVAVKALHSRDSHKQMQLLQELEVLSRIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYRRGNTPAIPWYERFRIAWEIASALVFLHSSKPKSIIHRDLKPANILLDQNLVSKIGDVGLSTVFNSDPSMSTAFMNSGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNSTLIKVLDIEAGYWPLEETYELARLGLHCAEMQRKDRPDLKNQVLPLLMTLKKVADEARNLASKVPAAIPNHFICPILQDVMNDPCVAADGYTYDRQAIEKWLQKNDNSPMTKLPLPDKNLIPNYSLLSAIVEWNSKRS* 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12833155 12838842 - Chy9G167470.1 Chy09g01031 233928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01031 809 SMART serkin_6 456 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01031 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Chy09g01031 809 Gene3D Transferase(Phosphotransferase) domain 1 529 737 - -
Chy09g01031 809 CDD RING-Ubox_WDSUB1_like 743 783 - -
Chy09g01031 809 SMART Ubox_2 742 804 IPR003613 GO:0004842|GO:0016567
Chy09g01031 809 Gene3D Phosphorylase Kinase; domain 1 418 528 - -
Chy09g01031 809 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 152 - -
Chy09g01031 809 Coils Coil 329 349 - -
Chy09g01031 809 ProSiteProfiles Protein kinase domain profile. 456 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01031 809 Gene3D HUPs 21 162 IPR014729 -
Chy09g01031 809 SUPERFAMILY RING/U-box 733 808 - -
Chy09g01031 809 Coils Coil 357 388 - -
Chy09g01031 809 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 19 805 - -
Chy09g01031 809 ProSiteProfiles U-box domain profile. 738 809 IPR003613 GO:0004842|GO:0016567
Chy09g01031 809 CDD STK_N 21 173 - -
Chy09g01031 809 SUPERFAMILY Protein kinase-like (PK-like) 434 714 IPR011009 -
Chy09g01031 809 Pfam U-box domain 739 808 IPR003613 GO:0004842|GO:0016567
Chy09g01031 809 MobiDBLite consensus disorder prediction 287 313 - -
Chy09g01031 809 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 738 809 IPR013083 -
Chy09g01031 809 PANTHER OS02G0152300 PROTEIN 19 805 - -
Chy09g01031 809 Pfam Protein kinase domain 458 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01031 809 ProSitePatterns Protein kinases ATP-binding region signature. 462 483 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01451 Chy-Chr5:18361498 Chy09g01031 Chy-Chr9:12833155 1.19E-17 dispersed
Chy09g01031 Chy-Chr9:12833155 Chy01g02190 Chy-Chr1:26459732 3.61E-121 dispersed
Chy09g01031 Chy-Chr9:12833155 Chy06g00167 Chy-Chr6:1087735 5.57E-120 transposed
Chy09g01031 Chy-Chr9:12833155 Chy04g00284 Chy-Chr4:2522498 1.48E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71479 PF00069 Pkinase 3.50E-40 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01031 - - csv:101217665 1470.68