Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01038 ATGCCTTCATGGTGGGGGAAGTCATCATCAAAAGAAGTAAAGAAAAGCAAGGAAAGTTTAATCGACACGTTGCAGAGAAAACTTAGAACTGCCGATGGTAAAACAAACAGCAAATCAGGAGAGTCTCCAAGAAATTGTAATGACACAATTTCTGAGCAGGGATCTCGATCTCCTAATCTTTCAAGATCAGTTTCCCCTTCCAAACAAGTTTTAAGATGTCAAAGCTTTTCTGAAAGGCCGCAAGCACAACCTCTTCCACTTCCTGGTGTGCAGCCACCAATTGTAGGTCGGACAGACTCTGGGATTAGTATTTCACCAAAGCCAAGATCTGAAAGGGGCTCCAAGCCAACATCGTTTCTACCACTTCCAAGACCAGCATGCATCCGTGGGCGGCCAAACCATGCAGATTTAGATGCAGATGTTGGTGTTGGCTCAGTGTCCAGTGAGAGCTCAACTGATAGCACGGATCTATTGGATTCACGCCATCGTAGTCCTCAGGCAACTGACTATGATCTTGGGACTAAAACTGCTGCAAGCAGTCCTTCCAGTGTCATTCTCAAGGATCAGTCTTCTACTGTCACCCAACCAAGTTTGCAAAAGGCCAGAAAACCGGCTAATATCTCATTGAGCAACCACATTTTCTCAACATCACCCAAGCGGAGACCTTTAAGCAGTCATGTTCCAAATCTGCAAGTTCCATATCATGGGAATGTATGCATTGCTCCTGATAGTTCAATGTCAAGTCCTTCTAGGAGTCCCATAAGGGCATTTAGCTCCGAGCAAGTTATTAATAATGCTGTCAGTACTGGAAAATTCTATATGGATGTCACATTTCCTGGGTCAGGCCATTGTTCCAGTCCTGGTTCTGGTTACAATTCTGGACATAATTCTATGGGTGGGGATTTGTCAGGGCAGTTATTTTTGCAACAAAGCCGGGGTAGCCCTGAATATTCTCCAGTACCCAGTCCCAGAATGACCAGCCCTGGCCCAAGCTCCAGAGTCCATAGTGGTGCAGTGACCCCAATTCATCCTAGGGCGGGAGGTATACCAACTGATTCACAGACAAGCTGGCCTGATGAGAAGCAAACTCACCGCCTGCCTCTACCTCCCGTTGCAATTTCCAACGCTCCTTTTTCTCATTCCAATTCAGCTGCAACTTCTCCCTCTGTTCCAAGAAGTCCTGGAAGGGCTGATAATCCAGCAAGCCCGGGCTCCCGTTGGAAAAAGGGGAAGCTCTTGGGTAGGGGCACTTTTGGACATGTGTATGTTGGTTTTAACAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAAGTTACATTATTTTCTGATGATGCGAAGTCCAAGGAGAGTGCCAAGCAATTAATGCAAGAAATTATCTTGTTGAGTCGTTTACGACATCCAAATATTGTGCAGTATTATGGATCTGAAACGGTTGGGGACAGGTTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGAATATGGACAGCTTGGAGATTCAGCACTTCGTAGTTATACTCAGCAAATATTGTCCGGGCTTGCATATTTACATGCTAAAAGTACAGTTCACAGGGATATCAAAGGAGCAAATATACTTGTTGATCCCACTGGTCGTGTTAAGTTGGCTGACTTTGGGATGGCAAAACATATCACTGGCCAATCGTGCCCTTTGTCATTTAAAGGAAGCCCGTATTGGATGGCACCCGAGGTTATCAAAAACTCAAATGGTTGCAACCTTGCGGTAGATATTTGGAGTCTTGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGTCAATATGAGGGAGTCGCTGCGATGTTCAAGATTGGCAACAGCAAAGAACTTCCTGAAATCCCAGATCACCTTTCACATGATGGAAAAGATTTTGTTAGACAATGTCTGCAACGGAATCCTGCTCATCGTCCTACAGCTGCTCAGCTTTTGGAACATCCTTTTGTGAAACATGCTGCACCTCTTGAAAGACCAATTTTAGGTTCTGAACATTCAGATCCAACTCCAGGAATTACAAATGGAGTAAGAACATTGGGTATTGAACAAGGAAGGAATCCCAGCTTCTTGGATTCTGATAGATCTGCAGCTCATTCATCTAGACTCCCAACAGCTGCTTTCCATTCCAGTGAAATTCATATTCCAAGGAACCTATCATGCCCTGTTTCGCCCATTGGAAGCCCACTGGTGCACTCACGGTCGCCACAACATCCCAGTGGAAGAATGTCTCCGTCACCCATATCTAGCCCTCGTAACATGTCGGGCGCATCTACTCCTCTCACAGGAGGAAGTGGTGCCATTCCACATCAGCATCTCAAGCAATCACTGTACCTACAGGAGGGTTTTGGGAACTTGCCAAAACCTTCAATGGCTCCTTATAGTAATGGTCCTTCCTTTCATGATACTAACCCTGACATCTTTCAGGGGATTCAGCCAGGCTCACACATCTTTTCTGAGCTTGTACACCATGAAACTGATTTTCTGGGCAAGCAGTTTGGAAAGCCTGCCTGGGAATTGTATGACGGGCAGGCGGTCTTGGCTGATCGTGTTTCCAGGCAGCTGCTGAGTGATCACATAACAACTCCCTCCCTGGATTTAAGTCCAAGCTCTCTTTTGACCAACCGCAAATAG 2670 45.58 MPSWWGKSSSKEVKKSKESLIDTLQRKLRTADGKTNSKSGESPRNCNDTISEQGSRSPNLSRSVSPSKQVLRCQSFSERPQAQPLPLPGVQPPIVGRTDSGISISPKPRSERGSKPTSFLPLPRPACIRGRPNHADLDADVGVGSVSSESSTDSTDLLDSRHRSPQATDYDLGTKTAASSPSSVILKDQSSTVTQPSLQKARKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYHGNVCIAPDSSMSSPSRSPIRAFSSEQVINNAVSTGKFYMDVTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPVPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTDSQTSWPDEKQTHRLPLPPVAISNAPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIILLSRLRHPNIVQYYGSETVGDRFYIYLEYVSGGSIYKLLQEYGQLGDSALRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPEIPDHLSHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKHAAPLERPILGSEHSDPTPGITNGVRTLGIEQGRNPSFLDSDRSAAHSSRLPTAAFHSSEIHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNMSGASTPLTGGSGAIPHQHLKQSLYLQEGFGNLPKPSMAPYSNGPSFHDTNPDIFQGIQPGSHIFSELVHHETDFLGKQFGKPAWELYDGQAVLADRVSRQLLSDHITTPSLDLSPSSLLTNRK* 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12879506 12884277 - Chy9G167540.1 Chy09g01038 233935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01038 889 MobiDBLite consensus disorder prediction 742 777 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 1 205 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 674 710 - -
Chy09g01038 889 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01038 889 MobiDBLite consensus disorder prediction 10 34 - -
Chy09g01038 889 CDD STKc_MEKK1_plant 406 663 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 283 317 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 738 781 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 169 205 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 35 81 - -
Chy09g01038 889 MobiDBLite consensus disorder prediction 283 410 - -
Chy09g01038 889 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Chy09g01038 889 Gene3D Transferase(Phosphotransferase) domain 1 405 680 - -
Chy09g01038 889 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 811 - -
Chy09g01038 889 SMART serkin_6 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01038 889 SUPERFAMILY Protein kinase-like (PK-like) 405 748 IPR011009 -
Chy09g01038 889 MobiDBLite consensus disorder prediction 375 393 - -
Chy09g01038 889 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01038 889 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 811 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00957 Chy09g01038 CCT
Chy06g00957 Chy09g01038 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00925 Chy-Chr2:6095744 Chy09g01038 Chy-Chr9:12879506 2.17E-114 dispersed
Chy03g01508 Chy-Chr3:17409966 Chy09g01038 Chy-Chr9:12879506 1.66E-105 dispersed
Chy05g01114 Chy-Chr5:15678396 Chy09g01038 Chy-Chr9:12879506 4.07E-79 dispersed
Chy02g01058 Chy-Chr2:7270531 Chy09g01038 Chy-Chr9:12879506 1.82E-138 transposed
Chy04g01198 Chy-Chr4:18401444 Chy09g01038 Chy-Chr9:12879506 2.05E-60 transposed
Chy06g00539 Chy-Chr6:3670357 Chy09g01038 Chy-Chr9:12879506 1.30E-20 transposed
Chy07g00059 Chy-Chr7:518162 Chy09g01038 Chy-Chr9:12879506 2.66E-62 transposed
Chy09g00569 Chy-Chr9:6250326 Chy09g01038 Chy-Chr9:12879506 4.83E-82 transposed
Chy09g00585 Chy-Chr9:6761056 Chy09g01038 Chy-Chr9:12879506 4.19E-22 transposed
Chy06g00957 Chy-Chr6:7050402 Chy09g01038 Chy-Chr9:12879506 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71480 PF00069 Pkinase 4.50E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01038 K20717 - csv:101222716 1728.76