Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01049 ATGAAAAGGATGAATGCAAACAACCCTAATAGTACAGTTGAAGATTCCTCCTCTGATCATCAACTTACTCACGATATTCATTCGACTGTCTTCCCGTATTTTGCTCGGTGGCAAACTACGTACGGAAAAGTATTTACATATTGGTTGGGGACAGAGCCATTCTTGTATATAGCAGAACCAGAATTAGTGAAGATATTATCAAAAGAAGTAAAAGCAAAGCATTGGGGAAAGCCATCAGTGTTCAAAAATGACAGAAAATCAATGTTTGGAAATGGTTTGGTAATGGCTGAAGGAGATGAATGGGTTCGCCAACGACATATCATTACTCCTGCGTTTAATCCTTCCAACTTGAAGGCAATGGCAAGCTTAATGGTGGAGTCCGCCACCCAAATGGTGGAGAGATGGGCTAACCTCGTCATCTCCGGCAACCCTCAAATCGAAGTCGAGCAAGAGATAACTTCCACCGCCGGCGAAATCATTGCCAAAACCAGCTTTGGAATCCATCATGAAAACGGCCGACAAGTCTTCAACAAACTCCGCCAACTCCAATTCACTCTATTCAAAACCAACCGCCTTGTCGGCGTCCCCTTCGCCGGGCTTTTGAACGCCGCCAAGGCCCGGGAGGCCAAACTCCTAGGGGAGGAGATCGACGAATTGTTTCGGTCGGTGATTGCGGAGAGGAGAGAAAATGCGGTGGCGGAGACGACGAGGACGACGGAGCAGCAGAATGATATTTTGAGTTTGCTTTTAAAGGAGAGTAGTAGTGGCGGTGGAGGAGGAGAAGGAAGGAGGCTGAGCACGGCGGAGCTGATTGATGAATGTAAAACGTTTTTTTTCGGTGGACATGAAACGACGGCGTTGGCATTGACGTGGACTTTGATGCTATTGGCTGTTCATTCTGAATGGCAAACAATATTGAGAGAAGAAATTAAGGAAGTTTTTGGTCATAATTTACAAGCTCAATTTGATTTCACTAACCTTTCTTCACTCAAAAAGATGGGATGGGTGATGAGTGAGGTCCTACGCCTATATCCATCAGCTCCAAATGTACAAAGACAAGCAAGAAAAGACATTACAATTAATGGACTCACAATCCCAAATGGGACCAACATGTGGATTGATGTTGTATCCATGCACCATGACCAAGCTGTTTGGGGTCACCAAGTCAATGAATTTCACCCCGAGAGGTTCCAAAACGACACTATTTCGGGAGGTTGCACACACAAGATGGGTTATTTACCCTTTGGCTTTGGGGGAAGAATGTGTATTGGTAGGCACTTGACCTTTATGGAGTATAAGATTGTTTTGACTCTTATTTTGTCTAGGTTTTCCTTCTCTTTGTCTCGGGATTATAAACATACGCCTTCTATAATGCTCTCGCTACGACCTGCCCATGGTCTGCCTCTTGTTTTTCGACTACTCGAAGATTGA 1431 44.65 MKRMNANNPNSTVEDSSSDHQLTHDIHSTVFPYFARWQTTYGKVFTYWLGTEPFLYIAEPELVKILSKEVKAKHWGKPSVFKNDRKSMFGNGLVMAEGDEWVRQRHIITPAFNPSNLKAMASLMVESATQMVERWANLVISGNPQIEVEQEITSTAGEIIAKTSFGIHHENGRQVFNKLRQLQFTLFKTNRLVGVPFAGLLNAAKAREAKLLGEEIDELFRSVIAERRENAVAETTRTTEQQNDILSLLLKESSSGGGGGEGRRLSTAELIDECKTFFFGGHETTALALTWTLMLLAVHSEWQTILREEIKEVFGHNLQAQFDFTNLSSLKKMGWVMSEVLRLYPSAPNVQRQARKDITINGLTIPNGTNMWIDVVSMHHDQAVWGHQVNEFHPERFQNDTISGGCTHKMGYLPFGFGGRMCIGRHLTFMEYKIVLTLILSRFSFSLSRDYKHTPSIMLSLRPAHGLPLVFRLLED* 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12952461 12955831 - Chy9G167650.1 Chy09g01049 233946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01049 476 Gene3D Cytochrome P450 19 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 470 - -
Chy09g01049 476 SUPERFAMILY Cytochrome P450 27 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 Pfam Cytochrome P450 28 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 MobiDBLite consensus disorder prediction 1 20 - -
Chy09g01049 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Chy09g01049 476 MobiDBLite consensus disorder prediction 1 17 - -
Chy09g01049 476 PRINTS E-class P450 group I signature 38 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 10 470 - -
Chy09g01049 476 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01049 476 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01049 Chy-Chr9:12952461 Chy09g00128 Chy-Chr9:1042262 6.63E-105 dispersed
Chy07g01085 Chy-Chr7:15787236 Chy09g01049 Chy-Chr9:12952461 6.60E-36 transposed
Chy06g00951 Chy-Chr6:6983859 Chy09g01049 Chy-Chr9:12952461 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01049 - - csv:101220403 896.73