Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01130 GACATCGTCATTGGAGGAACAGACACAGCATCAACCGTAATCGAATGGACAATGACAGAGCTACTACAACAACCAAACACAATGAAGAAAGTCATAGAAGAATTAACAAATGTGGTAGGTTTAAACCAAATGGTTGAAGAATTTCACTTATCTAAATTGCATTATTTAGATGCAACAATTAAAGAGACGCTTCGTTTACACCCACCAGTACCTCTTTTAGTGCCACGAAAGCCTAGCCAAACAACCACCCTAGAAGGGTATACTATCCCAAAGGGCTCAACTATCTACTTTAATGTTTGGGCCATCCAAAGAGATCCTAAATTTTGGGACAACCCCTTAAACTTCATGCCTGAGAGATTCTTGAATAATGAATCTAGTGAAAAAATGTATGATTTTAGCGGCAATAAGATAGAGTTTTGTCCATTTGGGGCAGGTAAAAAGTTATGTGCAGGAATTCCTTTAGCTGAGAGGTTGATGGTTTTAATATTAGCTTCATTGTTGCATGGATTTGAATGGAAATTACCCGATGGTTCAAAGCTTGATTTGGAAGAGAAGTTTGGAATTGTCACAAGAAAGTTGAACCCTTTGGTTGTCATTCCTACACCAAGGCTTTCCAACTTGGAGCTTTATAATGTAATGTAG 642 38.01 DIVIGGTDTASTVIEWTMTELLQQPNTMKKVIEELTNVVGLNQMVEEFHLSKLHYLDATIKETLRLHPPVPLLVPRKPSQTTTLEGYTIPKGSTIYFNVWAIQRDPKFWDNPLNFMPERFLNNESSEKMYDFSGNKIEFCPFGAGKKLCAGIPLAERLMVLILASLLHGFEWKLPDGSKLDLEEKFGIVTRKLNPLVVIPTPRLSNLELYNVM* 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13552976 13553617 + Chy9G168460.1 Chy09g01130 234027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01130 213 PANTHER OS08G0547900 PROTEIN 1 211 - -
Chy09g01130 213 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS E-class P450 group I signature 149 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS E-class P450 group I signature 139 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS P450 superfamily signature 149 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PRINTS P450 superfamily signature 140 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 PANTHER OS08G0547900 PROTEIN 1 211 - -
Chy09g01130 213 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 142 151 IPR017972 GO:0005506|GO:0016705
Chy09g01130 213 SUPERFAMILY Cytochrome P450 2 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 Pfam Cytochrome P450 2 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01130 213 Gene3D Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01130 Chy-Chr9:13552976 Chy09g01128 Chy-Chr9:13546901 2.93E-81 dispersed
Chy09g01130 Chy-Chr9:13552976 Chy09g01131 Chy-Chr9:13555284 5.26E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01130 - - csv:101220462 375.555