Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g01143 | ATGGAGGGAAGGGAGGGTGGTGGTGCAAGTAGTGGAGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTACAAAATAGCTCCGAGGACTTCCGATAACCCACCGCAGACTGGTGGATCAACGACACCCCCGGGGACTCAATCAACTTCGACGCCGTCGGCTTCAGCTCAGGTATCAGGACAACCTCCGCCGCCAACGGCGGCTTCATCAGTACCGGGAAAGAAGAAAAGAGGGAGGCCCAGAAAATATGGACCCGATGGCTCTGTTTCTATGGCTCTGTCTCCCAAGCCGATATCGTCATCAGTGCCCCCGCCGGTCATCGACTTCTCGACGGAGAAGAAGGGGAAAGTACGGCCGGCGAGCGCTGTGAGTAAAAGCAAGTTCGAAGTAGATAATTTAGGTGACTGGGTTCCGTGTTCTCTTGGTGCAAATTTTACGCCTCACATCATCACTGTCAATGCGGGCGAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCGAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCCGGAGGAACACTAACTTATGAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGGAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCATCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAGCTGATTCGAGAAATAAGTCAACTGATATCAATGTATCTCTACCCAGTGCTTGA | 993 | 50.15 | MEGREGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSGQPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPASAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTISPAPPTAAIPISCVDPKSNLSSSSSFRGDNWSMLPADSRNKSTDINVSLPSA* | 331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 13662780 | 13666503 | - | Chy9G168590.1 | Chy09g01143 | 234040 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g01143 | 330 | MobiDBLite | consensus disorder prediction | 264 | 330 | - | - | |
Chy09g01143 | 330 | CDD | DUF296 | 146 | 237 | IPR005175 | - | |
Chy09g01143 | 330 | MobiDBLite | consensus disorder prediction | 29 | 64 | - | - | |
Chy09g01143 | 330 | ProSiteProfiles | PPC domain profile profile. | 142 | 281 | IPR005175 | - | |
Chy09g01143 | 330 | MobiDBLite | consensus disorder prediction | 293 | 330 | - | - | |
Chy09g01143 | 330 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 | 10 | 328 | - | - | |
Chy09g01143 | 330 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 10 | 328 | IPR039605 | GO:0003680 | |
Chy09g01143 | 330 | Gene3D | - | 147 | 276 | - | - | |
Chy09g01143 | 330 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 144 | 265 | - | - | |
Chy09g01143 | 330 | MobiDBLite | consensus disorder prediction | 1 | 114 | - | - | |
Chy09g01143 | 330 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 147 | 260 | IPR005175 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy06g00871 | Chy09g01143 | CCT | |
Chy06g00871 | Chy09g01143 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy09g00976 | Chy-Chr9:12454527 | Chy09g01143 | Chy-Chr9:13662780 | 1.84E-79 | dispersed | |
Chy09g01143 | Chy-Chr9:13662780 | Chy10g00178 | Chy-Chr10:4339040 | 3.73E-121 | dispersed | |
Chy06g00871 | Chy-Chr6:6294210 | Chy09g01143 | Chy-Chr9:13662780 | 3.97E-84 | wgd | |
Chy06g00240 | Chy-Chr6:1603331 | Chy09g01143 | Chy-Chr9:13662780 | 5.06E-108 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g01143 | - | - | csv:101210208 | 553.132 |