Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01143 ATGGAGGGAAGGGAGGGTGGTGGTGCAAGTAGTGGAGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTACAAAATAGCTCCGAGGACTTCCGATAACCCACCGCAGACTGGTGGATCAACGACACCCCCGGGGACTCAATCAACTTCGACGCCGTCGGCTTCAGCTCAGGTATCAGGACAACCTCCGCCGCCAACGGCGGCTTCATCAGTACCGGGAAAGAAGAAAAGAGGGAGGCCCAGAAAATATGGACCCGATGGCTCTGTTTCTATGGCTCTGTCTCCCAAGCCGATATCGTCATCAGTGCCCCCGCCGGTCATCGACTTCTCGACGGAGAAGAAGGGGAAAGTACGGCCGGCGAGCGCTGTGAGTAAAAGCAAGTTCGAAGTAGATAATTTAGGTGACTGGGTTCCGTGTTCTCTTGGTGCAAATTTTACGCCTCACATCATCACTGTCAATGCGGGCGAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCGAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCCGGAGGAACACTAACTTATGAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGGAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCATCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAGCTGATTCGAGAAATAAGTCAACTGATATCAATGTATCTCTACCCAGTGCTTGA 993 50.15 MEGREGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSGQPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPASAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTISPAPPTAAIPISCVDPKSNLSSSSSFRGDNWSMLPADSRNKSTDINVSLPSA* 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13662780 13666503 - Chy9G168590.1 Chy09g01143 234040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01143 330 MobiDBLite consensus disorder prediction 264 330 - -
Chy09g01143 330 CDD DUF296 146 237 IPR005175 -
Chy09g01143 330 MobiDBLite consensus disorder prediction 29 64 - -
Chy09g01143 330 ProSiteProfiles PPC domain profile profile. 142 281 IPR005175 -
Chy09g01143 330 MobiDBLite consensus disorder prediction 293 330 - -
Chy09g01143 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 328 - -
Chy09g01143 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 328 IPR039605 GO:0003680
Chy09g01143 330 Gene3D - 147 276 - -
Chy09g01143 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 144 265 - -
Chy09g01143 330 MobiDBLite consensus disorder prediction 1 114 - -
Chy09g01143 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 260 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00871 Chy09g01143 CCT
Chy06g00871 Chy09g01143 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00976 Chy-Chr9:12454527 Chy09g01143 Chy-Chr9:13662780 1.84E-79 dispersed
Chy09g01143 Chy-Chr9:13662780 Chy10g00178 Chy-Chr10:4339040 3.73E-121 dispersed
Chy06g00871 Chy-Chr6:6294210 Chy09g01143 Chy-Chr9:13662780 3.97E-84 wgd
Chy06g00240 Chy-Chr6:1603331 Chy09g01143 Chy-Chr9:13662780 5.06E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01143 - - csv:101210208 553.132