Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01147 ATGGCTGCTTCTGGGGGTACTAGTTATAGAAATGGTGCCACTTCTAGAAACTCCCTTAAGCTCGATAAGCCCTTTTCTGCTAATTCCTCCAACTCCAAGTCTTCTCTTAAGTCAAAGTCTCTTCCCAATTCTGCTCTTCGCCGCAGCAGCCCTGCTGCTCTTGGAGTTGCCAAGGATGATGGTGGAGTTCCTGGAAGAGTTCGAGTGGCTGTTAGATTGCGACCGCGCAATACAGAAGAATCAATAGCCGATGCTGATTTTGCTGATTGTGTAGAATTGCAGCCAGAGCTTAAAAGGTTGAAACTTCGAAAGAACAACTGGGATTCAGATACTTATGAGTTTGATGAAGTGCTAACTGAGTTTGCATCTCAAAAACGTGTTTATGAAGTCGTGGCAAAACCTGTTGTGGAGAGTGTATTGGATGGGTACAATGGAACAATTATGGCATATGGTCAGACTGGTACTGGTAAGACATATACTCTTGGAAGACTAGGTGAGGAAGACACTGCTGATCGTGGAATCATGGTGCGTGCTATGGAGGACATCTTGGCTGAAGTTTCTTTGGAGACTGATTCCGTCTCAGTATCCTACCTGCAGCTTTATATGGAGAGCATACAGGACCTTCTTGACCCTGCAAATGATAACATTTCCATTGTTGAAGATCCTAAAACTGGAGATGTTTCAGTACCTGGGGCTACCCTCGTAGAAATTAGACACCAGGAGAGCTTTTTGGAACTACTAAGATTGGGGGAAGCTCATCGGTTTGCTGCGAATACAAAACTGAACACTGAATCTTCCCGTAGTCATGCAATTCTTATGGTACACGTAAAACGGTCTCTAAAAGGAAGGGATTCAACTCTGTCAAGTGATAGTTCTCATTTAGTTAAGACCCTGAAACCTCCAATTGTTCGGAAGGGAAAATTAGTGGTGGTAGATCTTGCTGGTTCGGAGCGTATTGACAAGTCAGGAAGTGAAGGACATACACTTGAAGAAGCGAAATCCATCAATCTCTCCCTGAGTGCATTAGGGAAGTGCATAAATGCACTTGCAGAGAATAGTGCACACGTTCCAGTTAGGGATTCAAAGCTGACAAGATTACTTCGGGATTCATTTGGGGGAACGGCAAGAACTTCATTGGTTATTACTATTGGTCCTTCACCTCGGCATCGTGGAGAGACCACGAGTACAATAATGTTTGGCCAACGTGCTATGAAGGTGGAAAATATGCTGAAGATAAAAGAAGAATTTGATTATAAAAGTTTGTCGAGAAGGTTAGACATTCAATTAGACAAACTGATTGCAGAACATGAAAGGCAGCAAAAGGCATTTGAATTTGAAATTGAGAGAATTACCAAAGAAGCACAGGATCGCATATCTGAGGCTGAAAGAAGTCATTCAAATGCCCTAGAGAAGGAAAGGCTGAAATATCAGAAGGATTACATGGAATCAATCAAGAAGCTTGAAGATCAATTGACGGTGAAGCAGAAGAAGCTTGGTGGGGAGAAAGTAATTAATGAAGAAGTTGCTGCATCTGCTTCTAGTGTAATTGCTAATGGGGAGGGTTTGACAGTGTCTGCTGACAAGGAAATGGCAGAGCTTAAGAAGCTGGTTAAAAAGGAAATAGTTTTGAGGAAAGCAGCAGAAGAGGAAGTTAACAATCTTAGAAATCAAGTAGCCCAACTGAAGAGATCAGAGATCTCATGCAATTCAGAGATCTTAAAGCTCCGGAAAACTCTGGAAGATGAGCAAAATCAGAAAAAAAAACTAGAAGGAGATATAGCTATGCTACAGAGCCAGTTGTTGCAATTGAGCTTTGAAGCAGATGAGACCAGTAGACGACTAGACAGAGGTGAGCCTGGTAAAGTCCTTGGTTCTCTCGATTCTCTCGTGCAACAAGTTAAGCACTCACAGGCTCAGGATGCTGGAAACGGGGAGAAGGCTTCAGTGGCCAAACTCTTTGAGCAAGTGGGACTGCAAAAGATCTTGTCGTTGCTGGAAGCTGAAGATTATGACGTCAGAATTCATGCTGTGAAAGTGGTTGCAAATCTAGCAGCTGAAGAAACAAATCAGCAAAAGATTGTTGAGGCTGGAGGCCTTACATCTTTGCTGATGCTACTCAGAAGCACTGAGGATGAGACAATTCACAGAGTTGCTGCAGGGGCGATTGCAAATCTAGCAATGAATGAGACCAACCAAGAGCTCATTATGTCCCAAGGAGGCATTAGCTTACTGTCCATGACCGCTGCCAACGCTGATGATCCCCAAACGCTTCGTATGGTTGCCGGAGCAATAGCCAATTTATGTGGCAATGATAAGTTGCAGATGAAGCTAAGGGGCGAAGGCGGTATTAAGGCATTGCTGGGTATGGTAAGATGCAGACATCCTGATGTTCTTGCACAAGTTGCTAGAGGAATTGCAAATTTTGCAAAGTGCGAGTCGAGGGCCTCTACACAAGGGACCAAGGCTGGAAAGTCTTTCTTAATTGAAGATGGAGCACTCCCATGGATTGTACAGAATGCCAACAATGAAGCATCAACTATCAAACGACATATCGAACTTGCACTCTGTCATTTAGCACAGCATGGTAGTCTCAATCTCTCTCTTATATCTGAACTTTTAAGCTTGACAAGTACTTTCGGAAATATTAACTCAAAAAACCATGTAATTGCTGATACTGCAGAAGTGAACGCAAAAGACATGATCATTGGAGGTGCCCTATGGGAACTGGTTCGAATATCTCAAGACTGTTCACGGGAAGACATAAGAACTCTTGCACATCGAACATTAATATCAAGTCCAACATTTCAAGCTGAAATGAGACGATTACGGATAGATTATTGA 2841 43.01 MAASGGTSYRNGATSRNSLKLDKPFSANSSNSKSSLKSKSLPNSALRRSSPAALGVAKDDGGVPGRVRVAVRLRPRNTEESIADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTADRGIMVRAMEDILAEVSLETDSVSVSYLQLYMESIQDLLDPANDNISIVEDPKTGDVSVPGATLVEIRHQESFLELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSLKGRDSTLSSDSSHLVKTLKPPIVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPVRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETTSTIMFGQRAMKVENMLKIKEEFDYKSLSRRLDIQLDKLIAEHERQQKAFEFEIERITKEAQDRISEAERSHSNALEKERLKYQKDYMESIKKLEDQLTVKQKKLGGEKVINEEVAASASSVIANGEGLTVSADKEMAELKKLVKKEIVLRKAAEEEVNNLRNQVAQLKRSEISCNSEILKLRKTLEDEQNQKKKLEGDIAMLQSQLLQLSFEADETSRRLDRGEPGKVLGSLDSLVQQVKHSQAQDAGNGEKASVAKLFEQVGLQKILSLLEAEDYDVRIHAVKVVANLAAEETNQQKIVEAGGLTSLLMLLRSTEDETIHRVAAGAIANLAMNETNQELIMSQGGISLLSMTAANADDPQTLRMVAGAIANLCGNDKLQMKLRGEGGIKALLGMVRCRHPDVLAQVARGIANFAKCESRASTQGTKAGKSFLIEDGALPWIVQNANNEASTIKRHIELALCHLAQHGSLNLSLISELLSLTSTFGNINSKNHVIADTAEVNAKDMIIGGALWELVRISQDCSREDIRTLAHRTLISSPTFQAEMRRLRIDY* 947
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13725180 13732246 - Chy9G168630.1 Chy09g01147 234044

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01147 946 ProSiteProfiles Kinesin motor domain profile. 66 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 656 698 IPR000225 GO:0005515
Chy09g01147 946 PANTHER KINESIN-RELATED 48 879 IPR027640 GO:0003777|GO:0007018
Chy09g01147 946 Coils Coil 530 564 - -
Chy09g01147 946 Gene3D - 448 931 IPR011989 -
Chy09g01147 946 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 697 740 IPR000225 GO:0005515
Chy09g01147 946 MobiDBLite consensus disorder prediction 1 47 - -
Chy09g01147 946 Pfam Kinesin motor domain 72 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 ProSitePatterns Kinesin motor domain signature. 306 317 IPR019821 GO:0003777|GO:0005524|GO:0007018
Chy09g01147 946 SUPERFAMILY ARM repeat 646 883 IPR016024 -
Chy09g01147 946 Coils Coil 477 497 - -
Chy09g01147 946 Coils Coil 572 599 - -
Chy09g01147 946 CDD KISc 66 404 - -
Chy09g01147 946 SMART arm_5 646 685 IPR000225 GO:0005515
Chy09g01147 946 SMART arm_5 686 727 IPR000225 GO:0005515
Chy09g01147 946 SMART arm_5 728 769 IPR000225 GO:0005515
Chy09g01147 946 SMART arm_5 770 810 IPR000225 GO:0005515
Chy09g01147 946 SMART kinesin_4 64 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 PANTHER KINESIN-LIKE PROTEIN KIN-UA 48 879 IPR033291 GO:0008017|GO:0032886|GO:0048364
Chy09g01147 946 PRINTS Kinesin heavy chain signature 307 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 PRINTS Kinesin heavy chain signature 142 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 PRINTS Kinesin heavy chain signature 259 276 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 PRINTS Kinesin heavy chain signature 356 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Chy09g01147 946 MobiDBLite consensus disorder prediction 1 59 - -
Chy09g01147 946 Coils Coil 433 471 - -
Chy09g01147 946 Gene3D Kinesin motor domain 59 436 IPR036961 -
Chy09g01147 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 444 IPR027417 -
Chy09g01147 946 Pfam Armadillo/beta-catenin-like repeat 689 726 IPR000225 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01147 - - K10396 csv:101209471 1669.83
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01147 Chy-Chr9:13725180 Chy03g01612 Chy-Chr3:18048479 3.07E-58 dispersed
Chy02g01753 Chy-Chr2:18628662 Chy09g01147 Chy-Chr9:13725180 5.41E-46 transposed
Chy06g00233 Chy-Chr6:1538118 Chy09g01147 Chy-Chr9:13725180 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g464 . . . . . . . . . . . Cma15g01176 . Car15g01064 . . . . . . . . . . . . . . . . . Cone8ag0352 . . . . . Chy09g01147 . . . . . . . . . . . Cmo15g01237 . . Car06g00966 . . . Bhi12g00358 . . . . . . . . . . . . . . . . Cme09g01679
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001054 3 5 3 2 3 2 5 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 5 2 3 80
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy09g01147 Chy_Chr09 FPKM 29.212301 30.137337 14.902852 16.671532 10.128891 11.53349 10.851863 29.634258 27.275507 27.628294