Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01155 ATGAGCGAAGAAGACGATATGGATTTCTTCACCTTCCCCTTCTTCATCTTCCTCATCTTCACTTTCATAACCCTCTGCCGTTTGATTCCGGCGAGACGAAACCCCAAGCTTCCCCCCGGACCAACCCCTCTTCCCATCATCGGAAACCTTTTGGCTCTTGGAGACAAACCCCACCTTTCTCTCACCAATCTCGCCAAGTCTTACGGTCCAATTATGTCCTTAAAGTTCGGCCAAGTCACCACCGTTGTTGTATCGTCCCCGGAGACAATCCAACAAGTTCTTCAAACACATGACAACGTCTTGTCTTACAGATTCATTCCCGATGCGGCAACAGTTTACGACCATGCCGAACTAGGATTCCCATGGATTCCCATCTCTCCTAATTACAAAAACCATAGAAAAATCTTCAACAACTATCTTTTATCTCCCATGGCTCTCGACGAAAGTCGAAATCTTCGCCGCATGAGGATAGACAGGCTTCTTGATAATATCCGACAATGCGCAGTGAACGGCGAGGTGGTGGACATTGGAAGAACTTTATTTTCAATGGCGCTTAATTTGATATCGTATTCGATTTGGTCTATGGATTTGGCGGATGTGGATTCAGAAATGACTAGAGAATTCAAGACAACCCTGAGAGGAAGCTTGGAAGAAATGGGAAGACCAAATATTAGTGATTTTTTTCCGGTGTTGAAGAAGATGGATATTCAAGGTGTAAGGAGACGCACCGCCGTTCATTTTGGAAAGATGTTAGGTTTGATCGATGAGATGATTGATAAACGGTTGAAGATGCAAGAGTCACCTGATTTCACACCCAAAAATGATATGCTACATCATCTTCTCAACATGAAGGAGGACAACAATGAGATTCCTCTTGATAGAAACCAAATCAAACATTCAATATTCGTTTTATTTTCAGGAAGCTCTGATACAACAGGATCAGTAGCACAATGGGCAATGACATATCTCTTAAAATACCCAAAGGTGATGTGTAAAGCCAAACAAGAGCTATTAGAAGTGATAGGTAAAGGGAATCCAATTGAAGAATCACACATGGAGAAGCTTCCATATTTACAAGCAATCATCAAAGAAGTCTTAAGAATGCAATCATCATTTCTAATTCCACGAAAATCAGAATCAGAAGTAACAATTTCAGGATTTACAATTCCAAAAGGGACTCAAATTATTGTGAATTTATGGGCTTCATGTAGAGACCCAAATTTGTGGGAAAATCCAGATGTGTTCATGCCAGAAAGGTTCTTGGAAAGTAAAGCAAGAAATTTTGAGTTTATTCCATTTAGTCATGGGAGGAGGACTTGTCCTGGTAAGGGAATGGCAATGAGAATGTTGTATTTGACGGTTGGTTCTTTGATTCATTGGTTTGATTGGAAGCTTGAAGATGGAGTTACACCTGAGAATTTGAATATGGATGCAAAATATGAACTTATTCTGGTCAAATCTCAATCAGTACGAGCTATACCTCTTCTTATTTAA 1494 40.5 MSEEDDMDFFTFPFFIFLIFTFITLCRLIPARRNPKLPPGPTPLPIIGNLLALGDKPHLSLTNLAKSYGPIMSLKFGQVTTVVVSSPETIQQVLQTHDNVLSYRFIPDAATVYDHAELGFPWIPISPNYKNHRKIFNNYLLSPMALDESRNLRRMRIDRLLDNIRQCAVNGEVVDIGRTLFSMALNLISYSIWSMDLADVDSEMTREFKTTLRGSLEEMGRPNISDFFPVLKKMDIQGVRRRTAVHFGKMLGLIDEMIDKRLKMQESPDFTPKNDMLHHLLNMKEDNNEIPLDRNQIKHSIFVLFSGSSDTTGSVAQWAMTYLLKYPKVMCKAKQELLEVIGKGNPIEESHMEKLPYLQAIIKEVLRMQSSFLIPRKSESEVTISGFTIPKGTQIIVNLWASCRDPNLWENPDVFMPERFLESKARNFEFIPFSHGRRTCPGKGMAMRMLYLTVGSLIHWFDWKLEDGVTPENLNMDAKYELILVKSQSVRAIPLLI* 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13789129 13791729 + Chy9G168710.1 Chy09g01155 234052

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01155 497 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 15 495 - -
Chy09g01155 497 Gene3D Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 Pfam Cytochrome P450 38 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01155 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Chy09g01155 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 495 - -
Chy09g01155 497 SUPERFAMILY Cytochrome P450 32 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01155 - - - csv:101218561 924.465
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01155 Chy-Chr9:13789129 Chy06g01855 Chy-Chr6:22335987 2.14E-97 dispersed
Chy09g01155 Chy-Chr9:13789129 Chy09g01156 Chy-Chr9:13792588 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g442 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00349 Chy09g01155 . . . . . . . . . . . . . . . . . . Bhi12g00547 . . . . . . Cla01g00330 . . . . . . Lsi09g00352 . . Cme09g01689
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000276 0 5 1 0 1 4 0 5 5 7 5 5 3 10 7 9 5 5 4 5 6 6 4 5 7 13 5 4 4 6 146
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy09g01155 Chy_Chr09 FPKM 11.057483 12.012781 22.969091 22.948645 14.465115 19.777058 15.323965 13.089395 11.619436 11.638762