Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01163 ATGAGTGGTTTTAGTGCAAGACTTACGGAAGAACACGTGAATGCGATGGAAGAGAAGGATGGTTTTGTGTCAGCTAGACGTGAAACGATAGTGCATTTGCACACAACTCACAGCCCTAATTTTCTAGGATTGAACCGTCAATTTGGGTTTTGGAAAGATTCAAACTTTGGAAAGGGAGTGATCATAGGAGTGTTAGATGGTGGAATCACACCAAGCCATCCTTCATTTGTTGATGCGGGAATGCCGCAACCGCCAGCCAAATGGAAAGGAAGATGTGAGTTTAATTTCTCTGCTTGTAACAACAAGCTTATAGGTGCAAGATCTTTGAATCTCGCATCACAAGCCTTAAAGGGAAAGATAACAACATTGGATGACTCTCCTATTGATGAAGATGGCCACAGAACTCACACAGCAAGCACTGCAGCCGATACTTTCGTCGACAATGCTGAGGCACTAGGGAATGCTTTCGGTACTGCTGTTGGGATGGCATTGTTAGATCACCTTGCCATTTACAAAGTTTGCTTTGGAGAAGGTTGCTCTGATGTTGACATTCTTGTAGGACTCGATGCGGCGGTTGAAGATGGTGTTGATGTGCTCTCTATATCACTCGGGGGGCCCACCTATACCATTCTTCGCAGACATTACGGCCATAGGTGCATTTGCAGCGATTCAAAAGGGGATTTTTTTGCAGCTAGCACAATTGATCGAAAAATCACAGTGACTGCAAAGCTTGGAAATGGAGAAGAATTCGATGGCGAATCTCTGTTCCAGCCAAATGATTTTCCTCAAACATTCTTACCACTTGTTTTCCTTGGTGAGAAGAAAGAAACGGTAGCATTATGTGCTGAAGGATCATTGAAAAACATTGATGTAAAAGGAAAAGTTGTAGTATGCGACAGAGGAGGAATTGCGAGAATTGCAAAAGGGGTTGAAGTGAAAAATGCTGGTGGTGCTGCCATGATCCTTCTCAACGCAGAATCAGATGGCTTCACTACTGAAGCAGATGCTCATGTTCTTCCGGCAAGCCATGTCAGCCATACAGCGGCACTGAAAATCAAAGCCTACATAAACTCAACAACATACCCAACAACCACAATCATATTCAAAGGAACCACAATTGGTGATGACTTCTCTCCAGCCATAGCTGCTTTCTCATCTCGAGGTCCCAGCCTCACAAGCCCCGACATCTTGAAACCAGACATAACTGGTCCCGGTGTCAGCATTTTAGCAGCATGGCCATTCCCATTAGACAACAACACAAACACAAAATCAACATTCAACATAGTTTCAGGAACATCCATGTCTTGTCCTCATCTCAGTGGCATTGCAGCTCTGATCAAAAGTGCTCATCCTGATTGGTCACCGGCTGCCACTAAATCCTCTATAATGACAACTCTAACATAA 1404 44.09 MSGFSARLTEEHVNAMEEKDGFVSARRETIVHLHTTHSPNFLGLNRQFGFWKDSNFGKGVIIGVLDGGITPSHPSFVDAGMPQPPAKWKGRCEFNFSACNNKLIGARSLNLASQALKGKITTLDDSPIDEDGHRTHTASTAADTFVDNAEALGNAFGTAVGMALLDHLAIYKVCFGEGCSDVDILVGLDAAVEDGVDVLSISLGGPTYTILRRHYGHRCICSDSKGDFFAASTIDRKITVTAKLGNGEEFDGESLFQPNDFPQTFLPLVFLGEKKETVALCAEGSLKNIDVKGKVVVCDRGGIARIAKGVEVKNAGGAAMILLNAESDGFTTEADAHVLPASHVSHTAALKIKAYINSTTYPTTTIIFKGTTIGDDFSPAIAAFSSRGPSLTSPDILKPDITGPGVSILAAWPFPLDNNTNTKSTFNIVSGTSMSCPHLSGIAALIKSAHPDWSPAATKSSIMTTLT* 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13834431 13835907 + Chy9G168790.1 Chy09g01163 234060

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01163 467 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 230 465 IPR045051 -
Chy09g01163 467 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 208 IPR045051 -
Chy09g01163 467 Gene3D Peptidase S8/S53 domain 230 465 IPR036852 GO:0004252|GO:0006508
Chy09g01163 467 PRINTS Subtilisin serine protease family (S8) signature 430 446 IPR015500 -
Chy09g01163 467 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Chy09g01163 467 PRINTS Subtilisin serine protease family (S8) signature 129 142 IPR015500 -
Chy09g01163 467 ProSiteProfiles Serine proteases, subtilase domain profile. 41 467 - -
Chy09g01163 467 SUPERFAMILY PA domain 253 384 IPR046450 -
Chy09g01163 467 Gene3D Peptidase S8/S53 domain 59 207 IPR036852 GO:0004252|GO:0006508
Chy09g01163 467 SUPERFAMILY Subtilisin-like 33 466 IPR036852 GO:0004252|GO:0006508
Chy09g01163 467 Pfam PA domain 281 351 IPR003137 -
Chy09g01163 467 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 230 465 - -
Chy09g01163 467 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 1 208 - -
Chy09g01163 467 Gene3D - 235 374 - -
Chy09g01163 467 Pfam Subtilase family 57 466 IPR000209 GO:0006508|GO:0008236
Chy09g01163 467 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 34 IPR037045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01163 - - - cpep:111786140 716.072
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01163 Chy-Chr9:13834431 Chy02g01279 Chy-Chr2:9390286 6.91E-125 dispersed
Chy09g01159 Chy-Chr9:13815579 Chy09g01163 Chy-Chr9:13834431 2.75E-178 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g434 . . . . . . . . . Cmo16g01045 Cma02g01498 . Car02g01261 . . . Cpe05g00291 . . . . . . . . . . . . . . Cone8ag0344 . . . . Csa05g00344 Chy09g01163 . . . Bda07g00509 . . . . . . Cmo02g01539 . . . . . . . Bhi12g00343 . . . Hepe06g1605 . Lcy12g1726 . . . . . . . Lsi09g00337 . . Cme09g01695
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002315 3 2 1 2 2 2 1 1 3 3 2 2 1 2 2 1 2 3 1 1 2 8 1 0 2 5 1 1 2 3 62
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy09g01163 Chy_Chr09 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0