Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01184 ATGGATTGGTTCGGTCAATTTTCTGATCCTCTTCCTTATTACCCCAACTGTACTTACAAATCTGAATCCTCTTCCACTCTTTCTGACGCCGGAACACCTCCTCAAACGCTAGTTAACTCTGACGAAGAAGTTATTCTCGCCTCCAACCGTCCAAAGCGCCGTGCTGGTCGCCGAATTTTTAAAGAAACTAGACATCCGGTTTACAGAGGAGTCCGACAAAGGAATAACGACAAATGGGTTTGTGAGCTGAGAGAGCCGAATAAGAAGACGAGGATTTGGCTTGGAACATACCCAACAGCAGAGATGGCAGCTCGTGCACATGACATAGCTGCACTAGCGTTAAGAGGTAAATCGGCTTGCCTCAATTTCGCTGACTCTGCTTGGCGGTTTCCTATTCCAACGAGTGATGACCCGGCTGTGATTAGAGAGGCGGCAGCGAGGGCGGCGAATGAATGTAATGTGGGTAGGGAAGAGGATGAGGGCGGTTTGAATCACCCGGAGGCATATCCTGACGGGATGGATTATGTGGACGATGAGGCTATGTCAAATATGCCAATGTTGCTTGCCAACATGGCAGAAGGACTACTGCTATCTCCTCCATCTTTTTGTGTCAACGATGACATAGAGTGGGACGATGAGACAACGAATGACGATGTGTCATTGTGGAGCTTCTAG 675 48.44 MDWFGQFSDPLPYYPNCTYKSESSSTLSDAGTPPQTLVNSDEEVILASNRPKRRAGRRIFKETRHPVYRGVRQRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDIAALALRGKSACLNFADSAWRFPIPTSDDPAVIREAAARAANECNVGREEDEGGLNHPEAYPDGMDYVDDEAMSNMPMLLANMAEGLLLSPPSFCVNDDIEWDDETTNDDVSLWSF* 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14035460 14036134 - Chy9G169000.1 Chy09g01184 234081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01184 224 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Chy09g01184 224 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Chy09g01184 224 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Chy09g01184 224 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Chy09g01184 224 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 1 224 - -
Chy09g01184 224 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Chy09g01184 224 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Chy09g01184 224 CDD AP2 68 126 IPR001471 GO:0003700|GO:0006355
Chy09g01184 224 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 224 IPR045277 GO:0003700
Chy09g01184 224 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00908 Chy09g01184 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01958 Chy-Chr4:25493658 Chy09g01184 Chy-Chr9:14035460 1.74E-39 dispersed
Chy09g00916 Chy-Chr9:11941196 Chy09g01184 Chy-Chr9:14035460 1.35E-63 dispersed
Chy09g01184 Chy-Chr9:14035460 Chy05g01389 Chy-Chr5:17949100 4.43E-30 dispersed
Chy09g01184 Chy-Chr9:14035460 Chy09g01185 Chy-Chr9:14050810 7.32E-36 tandem
Chy06g00907 Chy-Chr6:6649941 Chy09g01184 Chy-Chr9:14035460 2.88E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18512 PF00847 AP2 4.90E-14 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01184 - - csv:101204618 432.565