Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01185 ATGGCTGACCAAAAGGCGCTTCCAATTAATGAGAGCCAAATAGACCAATCTCTTGATCATAAATCTCCTTCTCCAATATCTAAACCAATTCCCATTGACCCTTTTGTTTCTTCTTCTGTCCCCACTCCCCAAAATCCAAATTCTAAGTCACAAGAACAACTCCCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCATCATCCCTGCTAATTTCTCCTCCTCCTCCTTCTTCTTCAACAACTAAGAAGCATTCTTTGTATAGAGGGATCCGGTGCCGAAGTGGGAAATGGGTGTCAGAGATTCGCGAGCCACGTAAGACGACGCGCATATGGCTTGGTACGTTTCCAACTGCTGAGATGGCTGCTACTGCTTACGATGTTGCTGCCCTTGCCCTCCGTGGTGACGATGCTGTCCTTAACTTCCCTGCCTCCATTCCAACCTACCCTGTTCCCGCGTCGACTTCTCCAGTTGACATTCGCACTGCTGCCTCCACTGCCGCTATTGCTGCAGCTGCTAAGGCTGTGAAGAAAGTTTCGTCAACTTCTTCGGTTGACGTAGGCACTATGGAAGATTGCAGCAAGAAGACTGGGATAGAGGAGTTTGTGGATGAAGAAGAAATTTTTGGGATGCCGGGTTTGCTGGCGGATATGGCGGAGGGGATGATGGTGTCGCCGCCGAGAATAAACTCGCCACCACTGTCGGATGACTCGATGGAAAATTTTGATGGAACGGAAAGTTTATGGAGCTACTTTTGA 756 49.34 MADQKALPINESQIDQSLDHKSPSPISKPIPIDPFVSSSVPTPQNPNSKSQEQLPPPPPPPPPPPPSSLLISPPPPSSSTTKKHSLYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTAEMAATAYDVAALALRGDDAVLNFPASIPTYPVPASTSPVDIRTAASTAAIAAAAKAVKKVSSTSSVDVGTMEDCSKKTGIEEFVDEEEIFGMPGLLADMAEGMMVSPPRINSPPLSDDSMENFDGTESLWSYF* 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14050810 14051565 - Chy9G169010.1 Chy09g01185 234082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01185 251 MobiDBLite consensus disorder prediction 9 23 - -
Chy09g01185 251 SUPERFAMILY DNA-binding domain 85 144 IPR016177 GO:0003677
Chy09g01185 251 ProSiteProfiles AP2/ERF domain profile. 86 142 IPR001471 GO:0003700|GO:0006355
Chy09g01185 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 77 251 - -
Chy09g01185 251 MobiDBLite consensus disorder prediction 1 86 - -
Chy09g01185 251 MobiDBLite consensus disorder prediction 50 73 - -
Chy09g01185 251 Pfam AP2 domain 86 134 IPR001471 GO:0003700|GO:0006355
Chy09g01185 251 PANTHER ETHYLENE RESPONSE FACTOR 77 251 - -
Chy09g01185 251 SMART rav1_2 86 148 IPR001471 GO:0003700|GO:0006355
Chy09g01185 251 Gene3D AP2/ERF domain 86 144 IPR036955 GO:0003700|GO:0006355
Chy09g01185 251 CDD AP2 85 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00907 Chy-Chr6:6649941 Chy09g01185 Chy-Chr9:14050810 1.61E-39 dispersed
Chy06g00908 Chy-Chr6:6663108 Chy09g01185 Chy-Chr9:14050810 4.71E-56 dispersed
Chy06g01942 Chy-Chr6:23340423 Chy09g01185 Chy-Chr9:14050810 1.48E-58 dispersed
Chy08g00915 Chy-Chr8:16587585 Chy09g01185 Chy-Chr9:14050810 6.95E-40 dispersed
Chy09g01185 Chy-Chr9:14050810 Chy09g01188 Chy-Chr9:14099979 3.23E-19 proximal
Chy09g01184 Chy-Chr9:14035460 Chy09g01185 Chy-Chr9:14050810 7.32E-36 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18513 PF00847 AP2 2.50E-10 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01185 - - csv:101204373 380.563