Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01215 ATGTTGAAGCTACCGCGGTGGAAACGATCGACGGCGGCGGCAACAGAGGAGACTACGAAAAATGCAACGGCTATTAACGACGACGAGGCCATGACGGCGGTGGTATGCGTTAGCGGCATGAGTTGCTCTGCATGCGCTGTTTCTGTTGAGAATTCCATCAAACACCTTCCAGGCATTCTCGATGCTGCCGTCGATTTCTTGAACGATAGGGCTCAAATCCTCTATCTTCCCAATCTCGTCGACGTAGAGACAATACTTAAAGCAATTGAAAATGCTGGATTTCCAGCTACAATATCAAAGGACGGGACTGATCATCTATCGAGAGAAGTATGTCGAATCCGAGTAAATGGAATGGGCTGCAATTCTTGCTCTTCCATGGTAGAATCAGTTTTGGAAGCAATGTATGGAGTACAAAAGGCTCACATTGCTTTGTTGAATGAGGAAGCAGAAGTTCATTATGATCCAAAGGTTGTTAATTGCAATCAGTTCATTATAGCCATACAAGACATGGGATTTGAAGCATTACCTATAACCATTGGTGAACACGTTACCAAGATTGACCTTAAGATCGATGGTATGCACAATGAAAACTCAACAACAAAAGTTAAAGAGTCCCTTGAATTGGTCCTGGGAATTGACGATGTCAATATTGATACGACATTAAGCAAAGTTACTATATCATACAGGCCTGATATAATAGGACCTAGAACTTTCATTGAAATACTTGAGTCGATCAAATCTGAGCATTTCAAAGCGACGATATATCCTGAAGATACGGAACGAGAAACTCATAAGGAGAAAGAAATTAAACAACATTATAAATATCTTATATGGAGCTCTGCTCTTTCTATTCCCGTTTTCTTAACTGCTATGGTGTTCATGTATATACCTGGAATCAAACAGACTTTAGATATCAAAGTTGTCAATATGATGAACGTCGGACATATTATCAGATGGAATTTATCAACTCCGGTGCAGTTCGTCGTAGGTTCGAGATTCTACTTTGGATCGTACAAAGCATTGCGTCGAGGTTCTGCCAACATGGATGTATTGGTTACTTTAGGAACAAATGCAGCTTATTTCTATTCTGTTTATGTAGTGTTAAGAGCAGCTACGTCTCCTACTTTCAATGGTACTGATTTCTTTGAAACCAGTTCAATGTTAATTACATTCATTCTACTTGGTAAGTATTTGGAGGTTTTAGCAAAAGGAAAGACCTCTGATGCTATTGCCAAGCTTAAACACTTGGCTCCCGAGACGGCAACACTCTTGACTTTAGATAGTCATGGAAATGTGATCAATGAAGCGGAAATCAGTAGTGAGTTGATCCAAAAGAATGATGTTATTAAGATCACACCAGGTGCAAGAGTAGCTTCTGATGGTCTTGTCGTATGGGGCGAAAGCCATGTTAACGAGAGTATGATCACAGGAGAAGCGAAACCAGTAACGAAAAGGACAGGGGATAAGGTGATTGGAGGAACTGTGAATGAAAATGGGGTATTGCATATAAAGGCAACTCATGTTGGATCAGAGAGTTCTTTATCGCAAATCGTTCGACTCGTCGAATCATCTCAATTGGCAAAAGCTCCTATTCAAAAATTTGCTGACCATATCTCTAAGTATTTTGTGCCTTTGGCAAGTACTACGAAACCAATCTTTCTACTGCTTTTTAGGTTTCTGTTCATTTTTATGCTTACCATTGATCACAATAGTTCTTTTTATACCTCTTTGCAGGTAATTTTACTTTCTTTTCTCACCTGGATTGCTTGGTTTTTGGCTGGAAAGTTGCATCTCTATCCTAAATCATGGTTGCCTTCTTCAATGGACAGTTTCGAGTTGGCTCTCCAATTTGGGATTTCTGTTATGGTCATAGCTTGCCCTTGTGCTCTCGGCCTTGCCACCCCGACTGCCATGATGGTCGGTACCGGCGTAGGTGCATCTCAAGGTGTACTAATAAAAGGAGGTCGAGCATTAGAATTTGCTCATAAGGTGAGTTGCATTGTGTTTGATAAGACAGGAACTCTAACAATTGGAAAGCCAGTGGTTGTAAATGTAAAACTTATGAACACTACAGTACTTGAAGAACTACTTGAACTCACTGCAGCAACCGAGGTTAACAGTGAGCACCCAGTAGCCAAGACCATTGTTGAATATGCCAAACAATTCAAGAAAGAACAAAATCCCATTTGGCCAGAAGCTCAAGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCATAGTAAAAAACAAGAAAATAATAGTTGGAAACAAGAGCTTGATGATGAACAATGACATCGAAATCCCAAGGGAAGTAGAAATGTTCCTTGTAGATGCCGAAGGTATGGCGCAAACTGCGGTCTTAGTGGCGATAGATCGAATGGTGTCAGGAGTTATCTCAGTGTCGGATCCATTGAAACCGGGTACCAAAGAAGTTATCTCCATTCTCAAGGCTATGGAAGTGAAGAGCATCATGATAACAGGTGACAACTGGGGCACTGCAAATTCCATTGCTAAAGAAGTTGGAATTGAAACAATCATTGCTGAGGCTAAGCCTCAGCAAAAAGCAGAAGAAGTGAAGAATCTTCAGACGGCAGGACACACAGTGGCAATGGTCGGAGACGGGATCAACGATTCGCCTGCTCTAGTAGCAGCAGATGTCGGGATGGCAATAGGAGCTGGCACTGACATTGCAATTGAGGCAGCAGACATTGTTCTAATGAAAAATGACTTGCAAGATGTTATAACTGCCATTCATCTTTCAAGAAAAACCTTTGCTAAAATTCGTTTGAATTACATTTGGGCTTTAGGTTATAATCTTCTTGCCATACCAATCGCGGCGGGCGTCTTGTTCCCTTCGACTCGGTTTCGGCTACCGCCGTGGATCGCTGGAGCTGCCATGGCAGCTTCTTCTGTTAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACAAAAGACCCAAGAAGCTTGATGAAATTGAGATTCAAATGAATGGAATAGTGGTTGAATGA 3012 41.47 MLKLPRWKRSTAAATEETTKNATAINDDEAMTAVVCVSGMSCSACAVSVENSIKHLPGILDAAVDFLNDRAQILYLPNLVDVETILKAIENAGFPATISKDGTDHLSREVCRIRVNGMGCNSCSSMVESVLEAMYGVQKAHIALLNEEAEVHYDPKVVNCNQFIIAIQDMGFEALPITIGEHVTKIDLKIDGMHNENSTTKVKESLELVLGIDDVNIDTTLSKVTISYRPDIIGPRTFIEILESIKSEHFKATIYPEDTERETHKEKEIKQHYKYLIWSSALSIPVFLTAMVFMYIPGIKQTLDIKVVNMMNVGHIIRWNLSTPVQFVVGSRFYFGSYKALRRGSANMDVLVTLGTNAAYFYSVYVVLRAATSPTFNGTDFFETSSMLITFILLGKYLEVLAKGKTSDAIAKLKHLAPETATLLTLDSHGNVINEAEISSELIQKNDVIKITPGARVASDGLVVWGESHVNESMITGEAKPVTKRTGDKVIGGTVNENGVLHIKATHVGSESSLSQIVRLVESSQLAKAPIQKFADHISKYFVPLASTTKPIFLLLFRFLFIFMLTIDHNSSFYTSLQVILLSFLTWIAWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAMMVGTGVGASQGVLIKGGRALEFAHKVSCIVFDKTGTLTIGKPVVVNVKLMNTTVLEELLELTAATEVNSEHPVAKTIVEYAKQFKKEQNPIWPEAQEFISIPGHGVEAIVKNKKIIVGNKSLMMNNDIEIPREVEMFLVDAEGMAQTAVLVAIDRMVSGVISVSDPLKPGTKEVISILKAMEVKSIMITGDNWGTANSIAKEVGIETIIAEAKPQQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRKTFAKIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYKRPKKLDEIEIQMNGIVVE* 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14271972 14277355 + Chy9G169310.1 Chy09g01215 234112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01215 1003 CDD HMA 37 97 IPR006121 GO:0046872
Chy09g01215 1003 SUPERFAMILY HMA, heavy metal-associated domain 27 100 IPR036163 GO:0046872
Chy09g01215 1003 PANTHER ATP7, ISOFORM B 15 546 - -
Chy09g01215 1003 PANTHER ATP7, ISOFORM B 568 992 - -
Chy09g01215 1003 Gene3D - 183 272 - -
Chy09g01215 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 603 954 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy09g01215 1003 ProSitePatterns Heavy-metal-associated domain. 115 145 IPR017969 GO:0046872
Chy09g01215 1003 Gene3D - 24 103 - -
Chy09g01215 1003 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 348 981 IPR027256 GO:0006812|GO:0016021|GO:0019829
Chy09g01215 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 381 943 IPR023298 -
Chy09g01215 1003 CDD HMA 113 174 IPR006121 GO:0046872
Chy09g01215 1003 ProSiteProfiles Heavy-metal-associated domain profile. 32 98 IPR006121 GO:0046872
Chy09g01215 1003 Pfam haloacid dehalogenase-like hydrolase 665 886 - -
Chy09g01215 1003 SFLD p-type atpase 650 924 IPR044492 -
Chy09g01215 1003 PRINTS H+-transporting ATPase (proton pump) signature 903 928 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy09g01215 1003 PRINTS H+-transporting ATPase (proton pump) signature 872 888 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy09g01215 1003 ProSitePatterns Heavy-metal-associated domain. 37 66 IPR017969 GO:0046872
Chy09g01215 1003 SUPERFAMILY Calcium ATPase, transduction domain A 436 521 IPR008250 -
Chy09g01215 1003 SUPERFAMILY HMA, heavy metal-associated domain 180 246 IPR036163 GO:0046872
Chy09g01215 1003 SFLD Haloacid Dehalogenase 650 924 - -
Chy09g01215 1003 Gene3D - 635 929 IPR023214 -
Chy09g01215 1003 Gene3D - 108 176 - -
Chy09g01215 1003 ProSiteProfiles Heavy-metal-associated domain profile. 185 254 IPR006121 GO:0046872
Chy09g01215 1003 ProSiteProfiles Heavy-metal-associated domain profile. 110 176 IPR006121 GO:0046872
Chy09g01215 1003 Gene3D - 403 525 - -
Chy09g01215 1003 CDD P-type_ATPase_Cu-like 276 968 - -
Chy09g01215 1003 Pfam E1-E2 ATPase 417 580 - -
Chy09g01215 1003 Pfam E1-E2 ATPase 576 646 - -
Chy09g01215 1003 Gene3D - 753 803 IPR023299 GO:0000166
Chy09g01215 1003 Gene3D - 675 752 IPR023299 GO:0000166
Chy09g01215 1003 SUPERFAMILY HMA, heavy metal-associated domain 111 180 IPR036163 GO:0046872
Chy09g01215 1003 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 15 546 - -
Chy09g01215 1003 Pfam Heavy-metal-associated domain 188 245 IPR006121 GO:0046872
Chy09g01215 1003 Pfam Heavy-metal-associated domain 113 173 IPR006121 GO:0046872
Chy09g01215 1003 Pfam Heavy-metal-associated domain 35 94 IPR006121 GO:0046872
Chy09g01215 1003 PRINTS P-type cation-transporting ATPase superfamily signature 668 682 - -
Chy09g01215 1003 PRINTS P-type cation-transporting ATPase superfamily signature 895 907 - -
Chy09g01215 1003 PRINTS P-type cation-transporting ATPase superfamily signature 471 485 - -
Chy09g01215 1003 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Chy09g01215 1003 PRINTS P-type cation-transporting ATPase superfamily signature 797 808 - -
Chy09g01215 1003 PRINTS P-type cation-transporting ATPase superfamily signature 819 829 - -
Chy09g01215 1003 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 568 992 - -
Chy09g01215 1003 SUPERFAMILY HAD-like 667 978 IPR036412 -
Chy09g01215 1003 CDD HMA 187 253 IPR006121 GO:0046872
Chy09g01215 1003 ProSitePatterns E1-E2 ATPases phosphorylation site. 670 676 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00480 Chy-Chr8:11807453 Chy09g01215 Chy-Chr9:14271972 4.58E-11 dispersed
Chy09g01215 Chy-Chr9:14271972 Chy11g00225 Chy-Chr11:2099911 0 dispersed
Chy09g01215 Chy-Chr9:14271972 Chy02g02243 Chy-Chr2:26524277 9.75E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01215 K17686 - csv:101220448 1798.48