Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g01215 | ATGTTGAAGCTACCGCGGTGGAAACGATCGACGGCGGCGGCAACAGAGGAGACTACGAAAAATGCAACGGCTATTAACGACGACGAGGCCATGACGGCGGTGGTATGCGTTAGCGGCATGAGTTGCTCTGCATGCGCTGTTTCTGTTGAGAATTCCATCAAACACCTTCCAGGCATTCTCGATGCTGCCGTCGATTTCTTGAACGATAGGGCTCAAATCCTCTATCTTCCCAATCTCGTCGACGTAGAGACAATACTTAAAGCAATTGAAAATGCTGGATTTCCAGCTACAATATCAAAGGACGGGACTGATCATCTATCGAGAGAAGTATGTCGAATCCGAGTAAATGGAATGGGCTGCAATTCTTGCTCTTCCATGGTAGAATCAGTTTTGGAAGCAATGTATGGAGTACAAAAGGCTCACATTGCTTTGTTGAATGAGGAAGCAGAAGTTCATTATGATCCAAAGGTTGTTAATTGCAATCAGTTCATTATAGCCATACAAGACATGGGATTTGAAGCATTACCTATAACCATTGGTGAACACGTTACCAAGATTGACCTTAAGATCGATGGTATGCACAATGAAAACTCAACAACAAAAGTTAAAGAGTCCCTTGAATTGGTCCTGGGAATTGACGATGTCAATATTGATACGACATTAAGCAAAGTTACTATATCATACAGGCCTGATATAATAGGACCTAGAACTTTCATTGAAATACTTGAGTCGATCAAATCTGAGCATTTCAAAGCGACGATATATCCTGAAGATACGGAACGAGAAACTCATAAGGAGAAAGAAATTAAACAACATTATAAATATCTTATATGGAGCTCTGCTCTTTCTATTCCCGTTTTCTTAACTGCTATGGTGTTCATGTATATACCTGGAATCAAACAGACTTTAGATATCAAAGTTGTCAATATGATGAACGTCGGACATATTATCAGATGGAATTTATCAACTCCGGTGCAGTTCGTCGTAGGTTCGAGATTCTACTTTGGATCGTACAAAGCATTGCGTCGAGGTTCTGCCAACATGGATGTATTGGTTACTTTAGGAACAAATGCAGCTTATTTCTATTCTGTTTATGTAGTGTTAAGAGCAGCTACGTCTCCTACTTTCAATGGTACTGATTTCTTTGAAACCAGTTCAATGTTAATTACATTCATTCTACTTGGTAAGTATTTGGAGGTTTTAGCAAAAGGAAAGACCTCTGATGCTATTGCCAAGCTTAAACACTTGGCTCCCGAGACGGCAACACTCTTGACTTTAGATAGTCATGGAAATGTGATCAATGAAGCGGAAATCAGTAGTGAGTTGATCCAAAAGAATGATGTTATTAAGATCACACCAGGTGCAAGAGTAGCTTCTGATGGTCTTGTCGTATGGGGCGAAAGCCATGTTAACGAGAGTATGATCACAGGAGAAGCGAAACCAGTAACGAAAAGGACAGGGGATAAGGTGATTGGAGGAACTGTGAATGAAAATGGGGTATTGCATATAAAGGCAACTCATGTTGGATCAGAGAGTTCTTTATCGCAAATCGTTCGACTCGTCGAATCATCTCAATTGGCAAAAGCTCCTATTCAAAAATTTGCTGACCATATCTCTAAGTATTTTGTGCCTTTGGCAAGTACTACGAAACCAATCTTTCTACTGCTTTTTAGGTTTCTGTTCATTTTTATGCTTACCATTGATCACAATAGTTCTTTTTATACCTCTTTGCAGGTAATTTTACTTTCTTTTCTCACCTGGATTGCTTGGTTTTTGGCTGGAAAGTTGCATCTCTATCCTAAATCATGGTTGCCTTCTTCAATGGACAGTTTCGAGTTGGCTCTCCAATTTGGGATTTCTGTTATGGTCATAGCTTGCCCTTGTGCTCTCGGCCTTGCCACCCCGACTGCCATGATGGTCGGTACCGGCGTAGGTGCATCTCAAGGTGTACTAATAAAAGGAGGTCGAGCATTAGAATTTGCTCATAAGGTGAGTTGCATTGTGTTTGATAAGACAGGAACTCTAACAATTGGAAAGCCAGTGGTTGTAAATGTAAAACTTATGAACACTACAGTACTTGAAGAACTACTTGAACTCACTGCAGCAACCGAGGTTAACAGTGAGCACCCAGTAGCCAAGACCATTGTTGAATATGCCAAACAATTCAAGAAAGAACAAAATCCCATTTGGCCAGAAGCTCAAGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCATAGTAAAAAACAAGAAAATAATAGTTGGAAACAAGAGCTTGATGATGAACAATGACATCGAAATCCCAAGGGAAGTAGAAATGTTCCTTGTAGATGCCGAAGGTATGGCGCAAACTGCGGTCTTAGTGGCGATAGATCGAATGGTGTCAGGAGTTATCTCAGTGTCGGATCCATTGAAACCGGGTACCAAAGAAGTTATCTCCATTCTCAAGGCTATGGAAGTGAAGAGCATCATGATAACAGGTGACAACTGGGGCACTGCAAATTCCATTGCTAAAGAAGTTGGAATTGAAACAATCATTGCTGAGGCTAAGCCTCAGCAAAAAGCAGAAGAAGTGAAGAATCTTCAGACGGCAGGACACACAGTGGCAATGGTCGGAGACGGGATCAACGATTCGCCTGCTCTAGTAGCAGCAGATGTCGGGATGGCAATAGGAGCTGGCACTGACATTGCAATTGAGGCAGCAGACATTGTTCTAATGAAAAATGACTTGCAAGATGTTATAACTGCCATTCATCTTTCAAGAAAAACCTTTGCTAAAATTCGTTTGAATTACATTTGGGCTTTAGGTTATAATCTTCTTGCCATACCAATCGCGGCGGGCGTCTTGTTCCCTTCGACTCGGTTTCGGCTACCGCCGTGGATCGCTGGAGCTGCCATGGCAGCTTCTTCTGTTAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACAAAAGACCCAAGAAGCTTGATGAAATTGAGATTCAAATGAATGGAATAGTGGTTGAATGA | 3012 | 41.47 | MLKLPRWKRSTAAATEETTKNATAINDDEAMTAVVCVSGMSCSACAVSVENSIKHLPGILDAAVDFLNDRAQILYLPNLVDVETILKAIENAGFPATISKDGTDHLSREVCRIRVNGMGCNSCSSMVESVLEAMYGVQKAHIALLNEEAEVHYDPKVVNCNQFIIAIQDMGFEALPITIGEHVTKIDLKIDGMHNENSTTKVKESLELVLGIDDVNIDTTLSKVTISYRPDIIGPRTFIEILESIKSEHFKATIYPEDTERETHKEKEIKQHYKYLIWSSALSIPVFLTAMVFMYIPGIKQTLDIKVVNMMNVGHIIRWNLSTPVQFVVGSRFYFGSYKALRRGSANMDVLVTLGTNAAYFYSVYVVLRAATSPTFNGTDFFETSSMLITFILLGKYLEVLAKGKTSDAIAKLKHLAPETATLLTLDSHGNVINEAEISSELIQKNDVIKITPGARVASDGLVVWGESHVNESMITGEAKPVTKRTGDKVIGGTVNENGVLHIKATHVGSESSLSQIVRLVESSQLAKAPIQKFADHISKYFVPLASTTKPIFLLLFRFLFIFMLTIDHNSSFYTSLQVILLSFLTWIAWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAMMVGTGVGASQGVLIKGGRALEFAHKVSCIVFDKTGTLTIGKPVVVNVKLMNTTVLEELLELTAATEVNSEHPVAKTIVEYAKQFKKEQNPIWPEAQEFISIPGHGVEAIVKNKKIIVGNKSLMMNNDIEIPREVEMFLVDAEGMAQTAVLVAIDRMVSGVISVSDPLKPGTKEVISILKAMEVKSIMITGDNWGTANSIAKEVGIETIIAEAKPQQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRKTFAKIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYKRPKKLDEIEIQMNGIVVE* | 1004 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 14271972 | 14277355 | + | Chy9G169310.1 | Chy09g01215 | 234112 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g01215 | 1003 | CDD | HMA | 37 | 97 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | SUPERFAMILY | HMA, heavy metal-associated domain | 27 | 100 | IPR036163 | GO:0046872 | |
Chy09g01215 | 1003 | PANTHER | ATP7, ISOFORM B | 15 | 546 | - | - | |
Chy09g01215 | 1003 | PANTHER | ATP7, ISOFORM B | 568 | 992 | - | - | |
Chy09g01215 | 1003 | Gene3D | - | 183 | 272 | - | - | |
Chy09g01215 | 1003 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 603 | 954 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy09g01215 | 1003 | ProSitePatterns | Heavy-metal-associated domain. | 115 | 145 | IPR017969 | GO:0046872 | |
Chy09g01215 | 1003 | Gene3D | - | 24 | 103 | - | - | |
Chy09g01215 | 1003 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 348 | 981 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Chy09g01215 | 1003 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 381 | 943 | IPR023298 | - | |
Chy09g01215 | 1003 | CDD | HMA | 113 | 174 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | ProSiteProfiles | Heavy-metal-associated domain profile. | 32 | 98 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | Pfam | haloacid dehalogenase-like hydrolase | 665 | 886 | - | - | |
Chy09g01215 | 1003 | SFLD | p-type atpase | 650 | 924 | IPR044492 | - | |
Chy09g01215 | 1003 | PRINTS | H+-transporting ATPase (proton pump) signature | 903 | 928 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy09g01215 | 1003 | PRINTS | H+-transporting ATPase (proton pump) signature | 872 | 888 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Chy09g01215 | 1003 | ProSitePatterns | Heavy-metal-associated domain. | 37 | 66 | IPR017969 | GO:0046872 | |
Chy09g01215 | 1003 | SUPERFAMILY | Calcium ATPase, transduction domain A | 436 | 521 | IPR008250 | - | |
Chy09g01215 | 1003 | SUPERFAMILY | HMA, heavy metal-associated domain | 180 | 246 | IPR036163 | GO:0046872 | |
Chy09g01215 | 1003 | SFLD | Haloacid Dehalogenase | 650 | 924 | - | - | |
Chy09g01215 | 1003 | Gene3D | - | 635 | 929 | IPR023214 | - | |
Chy09g01215 | 1003 | Gene3D | - | 108 | 176 | - | - | |
Chy09g01215 | 1003 | ProSiteProfiles | Heavy-metal-associated domain profile. | 185 | 254 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | ProSiteProfiles | Heavy-metal-associated domain profile. | 110 | 176 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | Gene3D | - | 403 | 525 | - | - | |
Chy09g01215 | 1003 | CDD | P-type_ATPase_Cu-like | 276 | 968 | - | - | |
Chy09g01215 | 1003 | Pfam | E1-E2 ATPase | 417 | 580 | - | - | |
Chy09g01215 | 1003 | Pfam | E1-E2 ATPase | 576 | 646 | - | - | |
Chy09g01215 | 1003 | Gene3D | - | 753 | 803 | IPR023299 | GO:0000166 | |
Chy09g01215 | 1003 | Gene3D | - | 675 | 752 | IPR023299 | GO:0000166 | |
Chy09g01215 | 1003 | SUPERFAMILY | HMA, heavy metal-associated domain | 111 | 180 | IPR036163 | GO:0046872 | |
Chy09g01215 | 1003 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 15 | 546 | - | - | |
Chy09g01215 | 1003 | Pfam | Heavy-metal-associated domain | 188 | 245 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | Pfam | Heavy-metal-associated domain | 113 | 173 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | Pfam | Heavy-metal-associated domain | 35 | 94 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 668 | 682 | - | - | |
Chy09g01215 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 895 | 907 | - | - | |
Chy09g01215 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 471 | 485 | - | - | |
Chy09g01215 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 872 | 891 | - | - | |
Chy09g01215 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 797 | 808 | - | - | |
Chy09g01215 | 1003 | PRINTS | P-type cation-transporting ATPase superfamily signature | 819 | 829 | - | - | |
Chy09g01215 | 1003 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 568 | 992 | - | - | |
Chy09g01215 | 1003 | SUPERFAMILY | HAD-like | 667 | 978 | IPR036412 | - | |
Chy09g01215 | 1003 | CDD | HMA | 187 | 253 | IPR006121 | GO:0046872 | |
Chy09g01215 | 1003 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 670 | 676 | IPR018303 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy08g00480 | Chy-Chr8:11807453 | Chy09g01215 | Chy-Chr9:14271972 | 4.58E-11 | dispersed | |
Chy09g01215 | Chy-Chr9:14271972 | Chy11g00225 | Chy-Chr11:2099911 | 0 | dispersed | |
Chy09g01215 | Chy-Chr9:14271972 | Chy02g02243 | Chy-Chr2:26524277 | 9.75E-67 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g01215 | K17686 | - | csv:101220448 | 1798.48 |