Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy09g01237 | ATGGCCACTTTCTTGTTCCTCTACATCACCATCTTGACGGTGATGGGAGTCAACCGATCTCCGTCCAAATGCAACAGCGTCGGCATTCAGGGCATTGCTTGGGCATTCGGCGGCATGATCTTTGCCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATTAATCCGGCGGTGACCTTCGGGCTTTTCCTGGCCAGAAAACTGTCCCTAACCAGAGCATTATTCTACATCATAATGCAATGCCTCGGCGCCATCTGCGGCGCCGGCGTCGTCAAGGGCTTCGAGGGGTCCTCCTACGTGCAGAAGCTCGGTGGTGCCAACTTCGTGTCCTCTGGCTACACCAAGGGCAGCGGTCTGGGTGCTGAGATCATCGGTACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACCGATGCTAAGAGAAATGCCAGAGATTCTCACGTCCCTATTTTGGCTCCTCTTCCCATTGGGTTTGCAGTGTTTTTGGTCCATTTGGCCACCATTCCCATCACCGGAACCGGCATTAATCCGGCAAGGAGTCTCGGAGCTGCCATCATCTACAACAGGCAACACGCTTGGGATGACCATTGGATCTTCTGGGTGGGACCTTTCGTTGGAGCTACTTTGGCTGCTATTTACCACCAAATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGA | 687 | 54.44 | MATFLFLYITILTVMGVNRSPSKCNSVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFEGSSYVQKLGGANFVSSGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDHWIFWVGPFVGATLAAIYHQIIIRAIPFKARA* | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 14434288 | 14435998 | + | Chy9G169530.1 | Chy09g01237 | 234134 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy09g01237 | 228 | CDD | MIP | 1 | 218 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | SUPERFAMILY | Aquaporin-like | 1 | 220 | IPR023271 | - | |
Chy09g01237 | 228 | Gene3D | Glycerol uptake facilitator protein. | 1 | 226 | IPR023271 | - | |
Chy09g01237 | 228 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 227 | IPR034294 | - | |
Chy09g01237 | 228 | PRINTS | Major intrinsic protein family signature | 73 | 92 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | PRINTS | Major intrinsic protein family signature | 36 | 60 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | PRINTS | Major intrinsic protein family signature | 158 | 180 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | PRINTS | Major intrinsic protein family signature | 122 | 140 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | PRINTS | Major intrinsic protein family signature | 198 | 218 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | PANTHER | AQUAPORIN PIP1-2-RELATED | 1 | 227 | - | - | |
Chy09g01237 | 228 | ProSitePatterns | MIP family signature. | 54 | 62 | IPR022357 | - | |
Chy09g01237 | 228 | Pfam | Major intrinsic protein | 1 | 215 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Chy09g01237 | 228 | TIGRFAM | MIP: MIP family channel proteins | 1 | 214 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy09g01237 | Chy-Chr9:14434288 | Chy10g00443 | Chy-Chr10:10543368 | 1.24E-140 | dispersed | |
Chy09g01237 | Chy-Chr9:14434288 | Chy11g00808 | Chy-Chr11:11587712 | 1.33E-122 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy09g01237 | K09872 | - | csv:101217440 | 455.292 |