Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01238 ATGGATGCCACGGTGGCGGTTGCAGTAGCTGCTTTGGTGGCGACGTACTTGATTTGGTTCTTGAATATCAAACGGTCCTTGAGTGGACCACGCGTTTGGCCACTACTAGGTAGTCTTCCAGGTTTGATTAAGAATAGTCATCGTATGCATGATTGGATTGTTGAGAATTTGCAGTCCACGGGTGGCACGTACCAGACTTGCATATGCGCCATTCCGTTTTTGACTAAGAAGCAAGGTCTGGTGACGGTCACGTGTGACCCGAAGAATTTGGAGCATGTTTTGAAGACACGATTCGAGAATTATCCAAAAGGGCCTAATTGGCAGGCCGTGTTTCATGATTTGCTTGGTGATGGAATCTTCAATTCAGATGGTGATACGTGGTTGTTCCAACGAAAGACTGCTGCGTTGGAATTTACTACTAGAACTCTTCGTCAAGCCATGGCTCGTTGGGTTAGTCGAGCTATTAAGTCTCGATTTTGCCCAATCCTTGAGTTGGCTCAACGTCGAGGTAAGCCTGTTGATCTTCAGGACCTTTTGCTTCGACTCACATTTGATAATATTTGTGGATTGACTTTCGGTAAGGATCCCCAAACGCTTGCCCCTGAATTGCCAGAGAATAGCTTCGCTATCGCATTTGATCAAGCCACAGAAGCTACATTGTGTCGCTTTATTTTGCCTGCCTTTGTATGGAAGCTAAAGAAATGGCTCCGACTCGGGATGGAAGTCACCTTAACCCAAAGCCTAAACCACACAAATCAATATTTAACCAATATCATCAACACACGTAGGCACGAATTATCCAATCAGCACCAGGTCAACACTAATCAAACCCCTCGCGACGACTTGCTATCAAGATTCATGAAAAAGAAGGAATCCTACTCAGACACATTCCTCCAACACGTGGCACTCAATTTCATCCTAGCTGGACGAGACACCTCATCTGTCGCCCTGAGCTGGTTCTTCTGGTTAGTCATCCAAACCCCACGAGTGGAGGAAAAAATCCTCGCTGAAATCTGCACCGTCCTGATGGAGACACGTGGCAAAGAAATGTCCACGTGGACGGAAGAGCCATTAGGATTTGAAGAAGTGGATCGATTGATTTACCTCAAAGCCGCCTTATCGGAAACTCTCCGACTCTACCCATCGGTGCCGGAAGATTCAAAACATGTGATAAACGACGATGTTTTACCCACCGGAACTTTCGTCCCTGCCGGCTCCTCCGTCACATATTCAATATATTCAACTGGTCGAATGAAATTCATCTGGGGAGAAGATTGTTTAGAATTCAAACCAGAGAGATGGTTAGATACAAATGAAAATGCTTATAAATTCGTTGCCTTTAATGCCGGCCCAAGAATTTGTTTAGGAAAAGATTTGGCTTATTTACAAATGAAGTCGATTGCGGCAGCGGTCTTGCTCCGCCACCGCCTGACTGTGGTCCCCGGCCACCGTGTTGAGCAAAAGATGTCGTTGACGTTGTTCATGAAGCATGGCCTTAAAGTTCACTTGCATCCCAGAGATTTAGGCCGTGTGGTGGAGACAATTAGCAAAACCGCGGCGGAGACGGCGACTTGA 1575 46.35 MDATVAVAVAALVATYLIWFLNIKRSLSGPRVWPLLGSLPGLIKNSHRMHDWIVENLQSTGGTYQTCICAIPFLTKKQGLVTVTCDPKNLEHVLKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKSRFCPILELAQRRGKPVDLQDLLLRLTFDNICGLTFGKDPQTLAPELPENSFAIAFDQATEATLCRFILPAFVWKLKKWLRLGMEVTLTQSLNHTNQYLTNIINTRRHELSNQHQVNTNQTPRDDLLSRFMKKKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVIQTPRVEEKILAEICTVLMETRGKEMSTWTEEPLGFEEVDRLIYLKAALSETLRLYPSVPEDSKHVINDDVLPTGTFVPAGSSVTYSIYSTGRMKFIWGEDCLEFKPERWLDTNENAYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVVPGHRVEQKMSLTLFMKHGLKVHLHPRDLGRVVETISKTAAETAT* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14437368 14438942 - Chy9G169540.1 Chy09g01238 234135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01238 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Chy09g01238 524 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 SUPERFAMILY Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PANTHER CYTOCHROME P450 86A7 5 508 - -
Chy09g01238 524 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PANTHER CYTOCHROME P450 5 508 - -
Chy09g01238 524 Pfam Cytochrome P450 28 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy09g01238 524 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01820 Chy-Chr1:23717694 Chy09g01238 Chy-Chr9:14437368 8.78E-158 dispersed
Chy04g01221 Chy-Chr4:18752791 Chy09g01238 Chy-Chr9:14437368 9.77E-128 dispersed
Chy05g00661 Chy-Chr5:8363203 Chy09g01238 Chy-Chr9:14437368 3.45E-126 transposed
Chy12g00280 Chy-Chr12:3083645 Chy09g01238 Chy-Chr9:14437368 0 transposed
Chy11g01647 Chy-Chr11:22966015 Chy09g01238 Chy-Chr9:14437368 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01238 K15398 - csv:101216733 1041.18