Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01256 ATGGCTACTAAAGAATCGAGTTCTACCACTGCCACTGAAGGCAAGATTAAAGGCGTTCTTACTCATGGTGGGCGATATGTGCAGTATAATGTGTACGGTAACTTGTTTGAGGTTTCAGCCAATGCTGCTGTAAATTCAGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCATTTGATAACATAATCGACGCCAAAAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATTGCCATTAGAGACATCATTAGGCCGCCAAAAAGAGAGGTTTTTAATGATGTGTATATTGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAACCACTGACGGATGATCATTGCCAGTACTTTTTATATCAGTTATTGCGTGGGCTGAAATATGTACACTCGGCCAAGGTCCTGCACCGTGATCTCAAGCCGAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGAGACTTTGGATTGGCAAGGACGACTTCTGAAACCGACTTCATGACTGAATATGTGGTTACTCGCTGGTACCGAGCACCAGAATTGCTCCTCAATTGTTCAGAGTACACTGCTGCTATTGATGTTTGGTCTGTAGGATGCATACTTGGTGAGATAATGACCAGAGAACCTCTCTTCCCTGGCAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCAGATGATGCCAGCCTAGGATTTCTCCGAAGTGATAATGCTCGAAGATATGTGAAGCAGCTTCCACAATACAGAAAACAACAATTCTCAGCTAGATTTCCCAACATGTCTCCATCTGCCCTCGATCTTCTTGAAAAGATGCTCGTATTTGATCCCAACAAACGCATTACAGTGGAGGAAGCACTTTGTCACCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTCTGTGCCAGGCCTTTCAATTTTGATTTCGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTGATCTGGAAAGAATCCGTGAGATTCAACCCCGACGAATCCGCTAGGAGGACGACTCTTTGCGTTTGA 1101 42.87 MATKESSSTTATEGKIKGVLTHGGRYVQYNVYGNLFEVSANAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQPLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNMSPSALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCARPFNFDFEQPSCTEEHIKELIWKESVRFNPDESARRTTLCV* 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14581312 14584697 + Chy9G169720.1 Chy09g01256 234153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01256 366 Pfam Protein kinase domain 42 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01256 366 SUPERFAMILY Protein kinase-like (PK-like) 42 320 IPR011009 -
Chy09g01256 366 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy09g01256 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 19 357 - -
Chy09g01256 366 Gene3D Phosphorylase Kinase; domain 1 39 349 - -
Chy09g01256 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 357 - -
Chy09g01256 366 Gene3D Transferase(Phosphotransferase) domain 1 110 339 - -
Chy09g01256 366 SMART serkin_6 14 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01256 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Chy09g01256 366 ProSiteProfiles Protein kinase domain profile. 21 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00689 Chy-Chr3:9434641 Chy09g01256 Chy-Chr9:14581312 0 dispersed
Chy07g01255 Chy-Chr7:17267359 Chy09g01256 Chy-Chr9:14581312 3.53E-129 dispersed
Chy09g01256 Chy-Chr9:14581312 Chy12g00894 Chy-Chr12:14319652 0 dispersed
Chy12g00122 Chy-Chr12:1329932 Chy09g01256 Chy-Chr9:14581312 1.46E-162 transposed
Chy11g01662 Chy-Chr11:23088308 Chy09g01256 Chy-Chr9:14581312 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71484 PF00069 Pkinase 8.70E-66 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01256 - - csv:101214254 726.472