Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy09g01257 | ATGGCGACGGTGATTTCGGCCGTTGCAACCGCCGGGCCGTACCGGTATGATTACGGGAGGTTGTTTCAACGCCCGGCCGCCGGAGCTCCCAGTCCAGCTGCAATTGTTTCGAGCTTTGGGATTACTTCAATGGCCGCCATCGCTGTTTATTACCGTTTCTCTTCCCAAATAATGGAGGGTGGAGAATTTCCACTTTTAGAAATGTTCGGGACTTTTGTACTATCTATTGGTTCTGCTGTGGGAATGGAATTTTGGGCGAGATGGGCTCACAAAGAGCTATGGCATGCTTCGTTATGGGATATGCACGAGTCTCATCACAAGCCGAGGGTTGGAGCATTTGAAAAGAACGATGTGTTTGCAATTATAAACGCGATTCCGGCCATTGCTCTTCTTTCTTTCGGCCTCTTCAATCAAGGCTTCTTTCCCGGCCTTTGTTTTGGTGCCGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCACGATGGCCTCGTACACCGTCGTTTCCCGGTGGGTCCGATAGCCGCTGTCCCCTACTTACGACGTGTCGCTGCTGCTCATCATATCCATCACACGGATAAATTCGACGGAGTTCCATACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGAAGTGGATGGCGAGGCAGAGCTGCAGAAGGAAATTAGGAGGAGAAAGGTTTACAGAAATTAA | 699 | 50.07 | MATVISAVATAGPYRYDYGRLFQRPAAGAPSPAAIVSSFGITSMAAIAVYYRFSSQIMEGGEFPLLEMFGTFVLSIGSAVGMEFWARWAHKELWHASLWDMHESHHKPRVGAFEKNDVFAIINAIPAIALLSFGLFNQGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEEVDGEAELQKEIRRRKVYRN* | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 14586519 | 14589633 | + | Chy9G169730.1 | Chy09g01257 | 234154 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy09g01257 | 232 | PANTHER | HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED | 33 | 228 | - | - | |
| Chy09g01257 | 232 | Pfam | Fatty acid hydroxylase | 79 | 205 | IPR006694 | GO:0005506|GO:0008610|GO:0016491 | |
| Chy09g01257 | 232 | PANTHER | BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC | 33 | 228 | IPR045019 | GO:0016491 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy06g00974 | Chy-Chr6:7188661 | Chy09g01257 | Chy-Chr9:14586519 | 2.01E-101 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy09g01257 | K15746 | - | csv:101214325 | 404.06 |