Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01320 ATGTCTCGGAATTCTGAGGCTGATGATCGTGAGATTGTTGAGAAGGATCCTTCTGGACGATATATACGGTATGATGAGATATTGGGTAAAGGGGCATTCAAGACAGTTTACAAAGCATTCGATGAAGTTGGTGGAATCGAAGTTGCTTGGAGTCAGGTGGACATTGAAGATGTCTTGCAGTCACCAGAGCAACTCCAAAGATTATATTCTGAAGTCCATCTGTTGAAGTCACTGAAACATGAAAATATCATCAAGTTCTATAGCTATTGGGTTGATGATAAACATAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCATAGGAAAGTTGACTTGAAGGCCTTCAAGAACTGGGCAAGGCAAATACTGCGAGGTTTAACGTATTTGCATGGTCACAACCCTCCAATCATTCACAGGGATTTGAAATGTGATAATATATTTGTCAATGGAAATACTGGAGAAGTTAAAATTGGAGATCTCGGATTGGCAATTGTCATGCAGCAGCCTACTGCTCGAAGTGTAATTGGCACTCCAGAGTTCATGGCTCCAGAACTTTATGATGAGGACTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTGGAAATTGTTACTTGTGAATACCCATATAATGAGTGCAAAAATTCTGCCCAAATATTCAAGAAGGTTACTTCAGGTATAAAGCCGGCTTCCCTTGAGAAAGTACTGGATCCTCAAGTTAAGCAATTTATTGAAAAGTGCCTGGTTCCTGCATCCATGAGATTACCTGCTAGTGAACTCTTGAAAGATCCTTTCCTTGCGGCCGAAAGCCCTAAGGACAATAGCTCTGAACTTTCAAGGTCATTGAATGAGCATTTCAAATCTGTGGATTCTCCACTGCTTGGTTCTCATCCAATGGAAACAGACCATAACTGCACCAAGCTCTCAGGTTCAGTGGCCTCATCTGTCAAAAGCAATAATGGAATTTCTCACTTTTCAACTCAAGAACTTCAGAGGCTCACTGAAAATAATGAATTGACACTGAAAGGAGACATGACTGATCATAATACGATGTCATTCCATTTGCGTATTGCTGAACTATATGGTAAATCTAGGAATATTCATTTTGCCTTCTATCTCGACTCTGATACTTCTTTGGCAATTGCTTTGGAGATGGTTGAACAACTTGAACTGTCGAATGAAGATGCGACTATCATAGCGAAGCTAATCGATGAGTTAATTGCTAAGTTTGTTCCTAGCTGGAAACCATGTCCAAACTATTGTGAAGAACAACAACAAAATACTCCTCATAGTCCTTCTGAAGCTCAAGAGGATAAGACCTTTATTTCTCCTTTCTTCTCTGAGCTGGTACTGTCATTTCCCATGGTGGCTGCTGCAAGGAATAATCTGACAGGTTTGGCAAAGGTCGAAGATCAAGAAAACCAGCAGTCGATTATTTCGTGTGCTTCCGTGGAATACATTTACTCAACTGTCTCAGACTACAGCATAGGAAAAGGATCAGAGTGTGGTGAGTTTGGTCACCCTGATTGCGAAAAAGCTTATATTAGCAGTGGAACAATTGATTTAGATGCAGAAGCTGTTGGATCTTTTTCGACGACAATCGATTTTGCAAAACCGTCGCTAATCTCTTCCTGCTCAGAAATGTCGAAAGAATTGAGTTTGTCTAGCTTTTCAACTCTTTCTATGGAAGAAAGAGATCACCAAGATGAACTGAAGATGGAGATTGATGCTATTGATTTGCAGTATCATCAATGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCAATTGAAAGTGCTAAGAAGAGGTGGATGTCTAAGAAGAAAGCTACGGGTATTTGA 1881 39.98 MSRNSEADDREIVEKDPSGRYIRYDEILGKGAFKTVYKAFDEVGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYSYWVDDKHKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILRGLTYLHGHNPPIIHRDLKCDNIFVNGNTGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEDYNELVDIYSFGMCMLEIVTCEYPYNECKNSAQIFKKVTSGIKPASLEKVLDPQVKQFIEKCLVPASMRLPASELLKDPFLAAESPKDNSSELSRSLNEHFKSVDSPLLGSHPMETDHNCTKLSGSVASSVKSNNGISHFSTQELQRLTENNELTLKGDMTDHNTMSFHLRIAELYGKSRNIHFAFYLDSDTSLAIALEMVEQLELSNEDATIIAKLIDELIAKFVPSWKPCPNYCEEQQQNTPHSPSEAQEDKTFISPFFSELVLSFPMVAAARNNLTGLAKVEDQENQQSIISCASVEYIYSTVSDYSIGKGSECGEFGHPDCEKAYISSGTIDLDAEAVGSFSTTIDFAKPSLISSCSEMSKELSLSSFSTLSMEERDHQDELKMEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKATGI* 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15120045 15122933 + Chy9G170360.1 Chy09g01320 234217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01320 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Chy09g01320 626 Gene3D Transferase(Phosphotransferase) domain 1 105 286 - -
Chy09g01320 626 SUPERFAMILY Protein kinase-like (PK-like) 24 280 IPR011009 -
Chy09g01320 626 Gene3D Phosphorylase Kinase; domain 1 5 103 - -
Chy09g01320 626 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 621 - -
Chy09g01320 626 ProSiteProfiles Protein kinase domain profile. 22 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01320 626 CDD STKc_WNK 20 279 - -
Chy09g01320 626 PANTHER WNK KINASE 4 621 - -
Chy09g01320 626 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01320 626 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 421 IPR024678 GO:0004674|GO:0005524
Chy09g01320 626 SMART serkin_6 22 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01320 626 Gene3D - 362 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00080 Chy-Chr6:529845 Chy09g01320 Chy-Chr9:15120045 0 dispersed
Chy09g01320 Chy-Chr9:15120045 Chy12g01235 Chy-Chr12:17046544 1.20E-157 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71487 PF00069 Pkinase 4.10E-51 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01320 K08867 - csv:101207748 1231.85