Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01356 ATGGGCTCTCACAACTCCGGTGAAGACTGTCTCGGTTGGGCTGCAAGAGACTCATCTGGGTTTCTATCTCCTTACAAATTCAATCGTAGGGTTCCTGGAGATGATGATGTTTCAATTACAATAACACACTGCGGAATTTGTTATGCAGATGTAGTGTGGACAAGAAATAAATTAGGAGATTCGAAATATCCTTTAGTGCCTGGACATGAGATTGCAGGAATCGTGAAAAATGTTGGCGCAAATGTTCAACGATTTAAAGTTGGAGATCATGTTGGGGTAGGAACTTATGTGAATTCTTGCAGACAATGCGAGTACTGTGAAGATTGTCAAGAAGTTAGTTGCACAAGTGGATGCACTCATACTTTTAATTCAATTGATGTTGACGGTACAGTTACAAAGGGAGGATACTCCAACTACATTGTTGTTCATGAGAGATATTGCTACAAAATACCTGACAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATTCTCCCATGATTCGGCATAATATGAATCAACCTGGTAAATCTCTTGGAGTGATTGGCCTTGGTGGTCTCGGCCACTTAGCCGTGAAGTTTGGGAAGGCTTTTGGACTTAATGTGACAGTTTTTAGCACTAGCATATCCAAGAAAGAAGAAGCCCTTGGCGTTCTTGGAGCAGACAAATTTGTTGTCTCATCTGACAACAAGCAAATGGAGTCCTTGTCTAAGTCCCTTGACTTTATTATCGATGCTGCGTCTGGTGATCACCCATTTGATCCATACATGTCTACGTTGAAGACTGGTGGCGTTATGGTTCTGGTGGGGTTTCCTTCTCAAGTTAAGTTCAGTCCTGCTAGCCTTATTTTGGGTATGAGAACCATTTCTGGTAGCGTGACTGGTGGCACTAAATTGACTCAAGAAATGATCGATTTCTGTGCCGCTCATGGAATATATCCAAACATAGAAGTGATTCCAATTCAGTATTCTAATGAAGCTATCGAAAGGGTAATGAAGAAGGATGTCAAGTACCGATTTGTTATTGATATCGAAGGCTCTCTGGAATGA 1068 41.29 MGSHNSGEDCLGWAARDSSGFLSPYKFNRRVPGDDDVSITITHCGICYADVVWTRNKLGDSKYPLVPGHEIAGIVKNVGANVQRFKVGDHVGVGTYVNSCRQCEYCEDCQEVSCTSGCTHTFNSIDVDGTVTKGGYSNYIVVHERYCYKIPDNYPLASAAPLLCAGITVYSPMIRHNMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALGVLGADKFVVSSDNKQMESLSKSLDFIIDAASGDHPFDPYMSTLKTGGVMVLVGFPSQVKFSPASLILGMRTISGSVTGGTKLTQEMIDFCAAHGIYPNIEVIPIQYSNEAIERVMKKDVKYRFVIDIEGSLE* 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15396659 15400670 - Chy9G170720.1 Chy09g01356 234253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01356 355 PANTHER ALDEHYDE REDUCTASE 7 354 - -
Chy09g01356 355 PANTHER - 7 354 - -
Chy09g01356 355 Pfam Alcohol dehydrogenase GroES-like domain 35 150 IPR013154 -
Chy09g01356 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Chy09g01356 355 Gene3D - 165 320 - -
Chy09g01356 355 CDD CAD1 12 349 - -
Chy09g01356 355 SMART PKS_ER_names_mod 14 348 IPR020843 GO:0016491
Chy09g01356 355 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Chy09g01356 355 Gene3D - 13 350 - -
Chy09g01356 355 SUPERFAMILY GroES-like 17 183 IPR011032 -
Chy09g01356 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Chy09g01356 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01356 Chy-Chr9:15396659 Chy11g00067 Chy-Chr11:729780 7.07E-123 dispersed
Chy09g01356 Chy-Chr9:15396659 Chy01g00100 Chy-Chr1:657397 1.95E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01356 K00083 - csv:101211438 715.301