Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01363 ATGGGTTTGCTCCGGTTCTTTAGAGTTAAGAGAAAATCCAAAGTTGCTGATAAAAAAACCATTCTCGATGCTCATATTCAACAGAGTTTCTTTGCTACAAGGTTTCGTTGGACTGAGATCGAGTCTTTCACTAAGAATTTCTCCACTCTTGTCGGCTCCGGCGGCTTCAGCAACGTTTATCTTGCTCGGACGGCGCCGGGGATGGCCGCTGCCGTTAAGATTTTAGGCGCTAGCGAGCGGCTTAACCGGATGTTCCGGCAAGAATTGGACATTCTTCTCAAACTCCGTCATCGTAATATTGTCAATTTCGTTGGTTATTGTGATGAACGAGATGAAGGAGCCTTGGTATTCGAATATGTTCCAAATGGCAACTTACAAGAGAAGCTCCACCGACGGCCAGCGGCGTCGGTTCTTCCATGGAAAATCCGGCTACTCATAGCTTTTCAGTTAGCACAAGCAATCGAATACCTCCATGAGAAATGCAGTTTACAAATCGTTCACGGCGATATAAAATCATCAAACATCTTACTAGACGAGCAATTCAACTGCAAATTATGCGATTTCGGTTCAGCAAAAATGGGATTTTCATCCGCGGTGGGGAATCCATCATCATCATCCTCGCCGTCTAGCCCATTCAGAGCAAAGCAATTGATGATGGGATCTCCAGGATATACAGATCCCCAATATCTAAGAACCGGAATCGCCTCAAAGAAAAACGATGTTTACAGCTTCGGCGTTGTTCTTTTAGAGCTAGTCACCGGAAAAGAAGCGTTCTGTTCGGAGAAGGGTCAAATTCTGACATCAATTTTACCTCCGGGTGTTCGCGACGGGGGAGGAATTAAACCGTGGGAGGTTTTGGAATTAGTTGATCCAAAACTGCGGGGAGATTTGGACGTGGACGAAGCAGGGGCGTTGATAAGAATAGCGGGGGAGTGCGTGAGACAGCCGCCGGCACCGAGGCCGAGGATCGGAGAGGTGGTGGAGATGATGAGGGAAAAGATGGGGAGTTTTGGGGAGGTGAAACGTGGCAGTAAAGGATTGGAGGAGATGGGGAGATGGTAA 1062 47.46 MGLLRFFRVKRKSKVADKKTILDAHIQQSFFATRFRWTEIESFTKNFSTLVGSGGFSNVYLARTAPGMAAAVKILGASERLNRMFRQELDILLKLRHRNIVNFVGYCDERDEGALVFEYVPNGNLQEKLHRRPAASVLPWKIRLLIAFQLAQAIEYLHEKCSLQIVHGDIKSSNILLDEQFNCKLCDFGSAKMGFSSAVGNPSSSSSPSSPFRAKQLMMGSPGYTDPQYLRTGIASKKNDVYSFGVVLLELVTGKEAFCSEKGQILTSILPPGVRDGGGIKPWEVLELVDPKLRGDLDVDEAGALIRIAGECVRQPPAPRPRIGEVVEMMREKMGSFGEVKRGSKGLEEMGRW* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15480181 15481572 + Chy9G170790.1 Chy09g01363 234260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01363 353 SUPERFAMILY Protein kinase-like (PK-like) 28 330 IPR011009 -
Chy09g01363 353 CDD STKc_IRAK 51 330 - -
Chy09g01363 353 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 19 340 - -
Chy09g01363 353 PANTHER BNAA02G22020D PROTEIN 19 340 - -
Chy09g01363 353 SMART serkin_6 45 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01363 353 Pfam Protein kinase domain 49 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01363 353 ProSiteProfiles Protein kinase domain profile. 45 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01363 353 Gene3D Transferase(Phosphotransferase) domain 1 120 341 - -
Chy09g01363 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Chy09g01363 353 Gene3D Phosphorylase Kinase; domain 1 8 119 - -
Chy09g01363 353 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01363 Chy-Chr9:15480181 Chy06g01078 Chy-Chr6:8908168 2.10E-55 dispersed
Chy09g01363 Chy-Chr9:15480181 Chy01g02228 Chy-Chr1:26698708 1.13E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71488 PF00069 Pkinase 5.20E-41 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01363 - - csv:101212406 646.351