Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01364 ATGGCGTTCGAGTGTATACGTGCGGACTCCCCAAAACGAAGCCACACTCTTGATGTCTCTCTTACTCGAAAGGTGGCAGCCGAATTTGTGGGCACATTCATCTTGATATTTGGTGCAACAGCTGCAACCATCATCAACCAAAAGTACAACTCCCCCATGTCATTGATCGGAAACGCCGCATGTGGCGGCCTAGCTGTGATGATCGTAATTCTCTCAATAGGACACATCTCGGGTGCCCACCTGAACCCGTCGCTCACCATCGCTTTGGCCACCCTCCGCCACTTCCCTTGGGCCCATGTCCCTGCCTACATCACCGCCCAAGTCTCTGCTTCCATATGTGCCTCCTTCACTCTTAAAGGCGTTTTTCACCCTTTCATGTCTGGTGGTGTCACAGTTCCGTCCGTTGGTACCGTTCAAGCCTTTGCTCTTGAATTCCTCATTACCTTCAATCTCTTGTTTGTCGTCACTGCTGTTGCTACAGATACTCGAGCAGTTAGAGAGTTGGCCGGAATTGCAGTTGGAGCTACAGTGATGCTCAACATTCTTATCGCAGGGCCATCCACCGGTGGTTCGATGAACCCAGTGAGGACTTTAGGCCCTGCCGTCGCCGCTGGAAATTACAGAGAACTGTGGATATACATGGTGGCTCCTACACTTGGGGCAATCATTGGCGCCGGAACCTACACCGCCGTGAAGCATAAAGATGATGGAATAGATGTTCTGCCGGAGGTGAGCAGTTTCCGTCGGTGA 750 51.87 MAFECIRADSPKRSHTLDVSLTRKVAAEFVGTFILIFGATAATIINQKYNSPMSLIGNAACGGLAVMIVILSIGHISGAHLNPSLTIALATLRHFPWAHVPAYITAQVSASICASFTLKGVFHPFMSGGVTVPSVGTVQAFALEFLITFNLLFVVTAVATDTRAVRELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAAGNYRELWIYMVAPTLGAIIGAGTYTAVKHKDDGIDVLPEVSSFRR* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15482715 15485164 - Chy9G170800.1 Chy09g01364 234261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01364 249 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Chy09g01364 249 Gene3D Glycerol uptake facilitator protein. 4 238 IPR023271 -
Chy09g01364 249 PANTHER AQUAPORIN NIP2-1 15 237 IPR034294 -
Chy09g01364 249 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 PRINTS Major intrinsic protein family signature 23 42 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 Pfam Major intrinsic protein 19 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01364 249 SUPERFAMILY Aquaporin-like 18 233 IPR023271 -
Chy09g01364 249 PANTHER AQUAPORIN NIP5-1-RELATED 15 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01364 Chy-Chr9:15482715 Chy01g02089 Chy-Chr1:25623948 2.06E-33 dispersed
Chy09g01364 Chy-Chr9:15482715 Chy09g01365 Chy-Chr9:15487902 1.38E-137 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01364 K09874 - csv:101212485 461.84