Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01365 ATGCCGGAATCGGAAAGTGGAACGCCGGTAGCATCGGCGCCAGCGACGCCGGGGACGCCGGGAGGACCGCTGTTTTCCGGGCTCCGAGTAGATTCTCTATCGTACGATCGTAAGTCAATGCCGCGGTGCAAGTGTTTGCCCGTGAATGCTCCCACGTGGGGCCAACCTCACACGTGCTTCACTGATTTCCCTGCTCCTGATGTCTCTCTCACTCGCAAGTTGGGAGCAGAATTTGTTGGGACATTCATCTTGATATTTGCTGCGACGGCAGGGCCCATTGTGAACCAAAAGTACAACGGCGTGGAGACTCTGATCGGAAACGCGGCATGTGCAGGGTTAGCGGTGATGATTGTAATTCTGTCAACAGGACACATTTCCGGTGCACACCTGAACCCATCACTCACCATTGCCTTTGCTGCCCTCCGCCACTTTCCATGGGTTCAAGTCCCCGCCTACATTGCCGCCCAAGTCTCCGCCTCCATTTGCGCCTCCTTCGCTCTCAAAGGGGTTTTTCACCCTTTCATGTCTGGTGGTGTCACCGTCCCCTCCGTCAGTATTGGCCAAGCCTTTGCTCTTGAATTTATCATCACTTTCAATCTCCTCTTTGTTGTCACTGCGGTTGCCACTGACACTCGCGCGGTCGGAGAGTTAGCAGGAATTGCAGTCGGAGCTACAGTGATGCTTAACATTCTTGTAGCCGGGCCATCAAGCGGTGGTTCGATGAACCCTGTTCGAACTTTGGGACCCGCCGTGGCTGCTGGAAATTACAAAGCATTGTGGGTTTATTTGGTGGCGCCAACGCTTGGGGCAATAATCGGCGCCGGAACTTACACCGCCGTCAAGCTGAGAGACGACGAAGTGGATGCTCCGTCGCAGGTAAGGAGCTTCCGGCGTTGA 897 55.07 MPESESGTPVASAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPAPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSIGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAAGNYKALWVYLVAPTLGAIIGAGTYTAVKLRDDEVDAPSQVRSFRR* 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15487902 15491782 - Chy9G170810.1 Chy09g01365 234262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01365 298 MobiDBLite consensus disorder prediction 1 24 - -
Chy09g01365 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Chy09g01365 298 Gene3D Glycerol uptake facilitator protein. 64 292 IPR023271 -
Chy09g01365 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 9 296 - -
Chy09g01365 298 PANTHER AQUAPORIN NIP2-1 9 296 IPR034294 -
Chy09g01365 298 SUPERFAMILY Aquaporin-like 69 286 IPR023271 -
Chy09g01365 298 Pfam Major intrinsic protein 68 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01365 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01365 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01365 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01365 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01365 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Chy09g01365 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01540 Chy-Chr4:22005911 Chy09g01365 Chy-Chr9:15487902 1.81E-70 dispersed
Chy07g01561 Chy-Chr7:19849649 Chy09g01365 Chy-Chr9:15487902 5.43E-116 dispersed
Chy09g01365 Chy-Chr9:15487902 Chy01g02089 Chy-Chr1:25623948 4.97E-29 dispersed
Chy09g01364 Chy-Chr9:15482715 Chy09g01365 Chy-Chr9:15487902 1.38E-137 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01365 K09874 - csv:101212651 569.696