Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01416 ATGAGCTTCAAAAGGGACCTGGAGCTTGTCGTCTTCGTTTTCTGTGCAGTTTTCTGGTATGCAGCGACTTTTTCTCCGGTCATGTCAGAGCCGATCAAAGACAAGGAAGCTTTGCTTAATTTTATTAACAAGATGGATCACTCACACGCGATCAATTGGAAAAAGAGCACTTCTTTGTGCAAGGAGTGGATTGGAGTTCAATGCAACAATGATGAATCTCAAGTTGTAGGTTTGCGATTGGCTGAAATTGGCTTACATGGTTCGATCCCAGTGAACACTCTTGGCCGACTATCGGGACTTGAAACTCTAAGCCTAGGATCAAATTACATATCAGGGTCTTTCCCTTCTGACTTCCAAAAACTGAGAAATCTCAACACACTCTACTTGGAAAACAACGGGTTTTCTGGTCCATTGCCATTGGATTTCTCGTTATGGAAGAATCTCAGCATCATTGATTTGTCCAACAATGCCTTCAACGGGAGCATCCCTCGCTCGATATCAAACATGACACATCTAACAACATTAAACCTCGCCAATAACTTACTCTCTGGTGAGATTCCAGACCTCCACCTACCTAGTTTGCAGGACTTGGATCTTTCGAACAACTTCCTCACAGGAAATGTCCCGCAGTCCCTTCAAAGATTTCCAAGTCGGGCATTCTCCGGTAACAACCTTGTCCCCAAGATTAAGAATGCCGTTCCTCCAGTTCGTCCTGGACAGTCGCCCAATGCAAAGCCATCAAAGAAAGGTACAACAACAATTGGTGAAGCAGCAATTTTAGGCATTATAATTGGAGGTTCTGCAATGGGGTTAGTTATAGCAGTCACTTTGATGGTTATGTGCTGCTCAAACGGAAGAGTGAAAAACAATGCCTCATCAAAGCTGGACAAACAAGATTTGTTTGTAAAGAAAAAGGGATCTGAGACACAAAGCAACAGTCTCAAGTTTTTTCAGAGTCAGAGCCTTGAGTTTGACTTGGAGGACTTGTTGAGGGCGTCTTCTACGGTGCTCGGGAAGGGGACGTCTGGGACGACGTATAAGGCAACATTCGAAGACGGAAATGCTGTGGCAGTGAAGAGGTTGAAGGAAGTGAATGTTTCAAAGAAAGAATTTGAGCAGCAGATGGAAGTGGTAGGAAGCATTGAACATGAAAATGTATGTGGTTTAAGGGCATACTATTATTCGAAGGATGAGAAACTCATGGTCTTCGACTTTTACCAACGTGGAAGTGTCTCCGCAATGTTGCATGTTGCAAGAGAGAAAAGGCAGTCTCCACTTGACTGGGAAACTCGACTCCGAATCGCCATTGGTGCCGCCAGAGGAATCGCTCGCATCCATTCACAAAACTGCGGCAAACTTCTTGTCCATGGAAACATCAAGGCATCAAACGTATTCCTTAACTCCCACGGCTACGGTTGCGTCTCCGACGCCGGTGTCGCTGCTCTCATGAACCTCATGGCTCCACCAGCCACCAGATCCGCCGGATACCGTGCTCCCGAACTCAAGGACTCTCGCAAAGCATCTCAAGCCTCTGATACTTACAGCTTCGGCGTCGTGCTTCTCGAGCTCCTCACCGGAAAATTTCCACTGCATACAAAGGGAGGTAACGGTGGAGATCAGATAATCCACCTGGTGCGGTGGGTGAACGCGGTGGTCCGAGAGGAGTGGACGGCGGAGGTGTTCGACGTGGAGCTTTTGAGGTATCCTAACATAGAGGAGGAGATGTTAGAGACGTTGCAAATTGCGTTATCTTGTGTAGGAAGAGTTCCGGATGATCGGCCGGCAATGGCGGATGTTGCGGCTCGTTTGGAGGGAGTTCGCCGGGTGAGCGGCGTAGGAAGCTTACCACCGGTGCTGCCGCCGGCGTTGGAACGCGGAGCGGAGGAGTTGGTCCAGATTCAAGTGAACGTTGGTGAGGGTGACGGTGGAGCTCCGTCGAGATCGAATTGA 1950 48.1 MSFKRDLELVVFVFCAVFWYAATFSPVMSEPIKDKEALLNFINKMDHSHAINWKKSTSLCKEWIGVQCNNDESQVVGLRLAEIGLHGSIPVNTLGRLSGLETLSLGSNYISGSFPSDFQKLRNLNTLYLENNGFSGPLPLDFSLWKNLSIIDLSNNAFNGSIPRSISNMTHLTTLNLANNLLSGEIPDLHLPSLQDLDLSNNFLTGNVPQSLQRFPSRAFSGNNLVPKIKNAVPPVRPGQSPNAKPSKKGTTTIGEAAILGIIIGGSAMGLVIAVTLMVMCCSNGRVKNNASSKLDKQDLFVKKKGSETQSNSLKFFQSQSLEFDLEDLLRASSTVLGKGTSGTTYKATFEDGNAVAVKRLKEVNVSKKEFEQQMEVVGSIEHENVCGLRAYYYSKDEKLMVFDFYQRGSVSAMLHVAREKRQSPLDWETRLRIAIGAARGIARIHSQNCGKLLVHGNIKASNVFLNSHGYGCVSDAGVAALMNLMAPPATRSAGYRAPELKDSRKASQASDTYSFGVVLLELLTGKFPLHTKGGNGGDQIIHLVRWVNAVVREEWTAEVFDVELLRYPNIEEEMLETLQIALSCVGRVPDDRPAMADVAARLEGVRRVSGVGSLPPVLPPALERGAEELVQIQVNVGEGDGGAPSRSN* 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15799984 15802213 + Chy9G171320.1 Chy09g01416 234313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01416 649 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515
Chy09g01416 649 Pfam Protein kinase domain 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01416 649 MobiDBLite consensus disorder prediction 231 250 - -
Chy09g01416 649 SUPERFAMILY Protein kinase-like (PK-like) 335 621 IPR011009 -
Chy09g01416 649 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Chy09g01416 649 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Chy09g01416 649 Gene3D Ribonuclease Inhibitor 145 234 IPR032675 -
Chy09g01416 649 SUPERFAMILY L domain-like 49 215 - -
Chy09g01416 649 PANTHER LRR RECEPTOR-LIKE KINASE 22 609 - -
Chy09g01416 649 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
Chy09g01416 649 Pfam Leucine rich repeat 88 133 IPR001611 GO:0005515
Chy09g01416 649 Gene3D Transferase(Phosphotransferase) domain 1 407 611 - -
Chy09g01416 649 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Chy09g01416 649 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy09g01416 649 PANTHER OS05G0588300 PROTEIN 22 609 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01277 Chy-Chr9:14792785 Chy09g01416 Chy-Chr9:15799984 0 dispersed
Chy09g01416 Chy-Chr9:15799984 Chy11g01173 Chy-Chr11:17853820 6.82E-171 dispersed
Chy01g01100 Chy-Chr1:12443511 Chy09g01416 Chy-Chr9:15799984 1.93E-65 transposed
Chy12g01385 Chy-Chr12:18028647 Chy09g01416 Chy-Chr9:15799984 1.89E-95 transposed
Chy06g01272 Chy-Chr6:11694990 Chy09g01416 Chy-Chr9:15799984 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71489 PF00069 Pkinase 1.30E-30 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01416 - - csv:101219980 1221.07