Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01437 ATGAATAACAATAACAGCTACAACAAGCTCCACACCTCCCACTCCGCCAACACCACTCCGGCAGCTTCCTTCCGCCTCTCCGGCAATGATCCCCCTCCGCCCTCCTCCTCCCTCCGTCGTCGTTCTCGTATCCTAATCATCTCTTTCATGTCCGTTCTCCTTATTGCTGCTTCAGTCGTTTCCGCGGCTATCCTTGTTCGATCACATATGGCATCTAGCCAATCCCATTTCCCTCACAACAAGCCCTCCCAAGCCATCTCCCGCGCGTGTAGCCACACGCTCTACCCATCTCTTTGCCTCTCCTCTCTTCTATCCTTCCCCGGCTCACAATCGGCCGACGTTCATGATCTTGTTCATATCTCTCTCAACTTAACTCTTCAGCATCTCACCAAAGCTCTTTACTCCACTTCTCAAATCCCTATCTTACAAATCTCTAAGGACCCTTTGGCTCATTCCGCTTATGAAGATTGTATGGAGCTTTTAAACGACGCCATTGATGCTTTTTCTCTCTCTCTTTTCTCTACGGATGCTTCCAATCATGATATCATGACGTGGCTTAGTGCTGCATTGACTTACCATGACACGTGTACGGCTGGATTTCAGGATGTGGCTGACTTGGGTGTTAAGGATGAGGTGGAGGCCAAGTTGAGTGATTTGTCGGAGATGATTAGTAATTCTTTGGCCATATTTTCTGGGTTTGGTGGTGGGGATTTGCCAGTGGAGAATAGAAAGCGGCGGCGGTTGATGGAAACTAGTACGCCGTCGTGGGCGGCGGAGAATGGTGGTGATCATGAGGGGTTTCCTGCGTGGTTGAGTGGGAAGGATCGGCGGCTTTTGGCTGCTCCGCTATCGACGATTCAAGCGGATATTGTGGTTGCTAAGGATGGTTCTGGCAAATTCAAGACGGTGGCTGAGGCCATTGAGGCCGCTCCGTCGTCGAGTGGCCGCCGGATCATCATCTACATTAAGGCTGGAAAGTACGAAGAGGAGAATTTGAAGGTGGGAAGGAAGAAAACAAACTTGATGTTCGTGGGAGATGGGAAGGGCGTAACTGTCATTTCAGGTGGCAAAAGTGTTTATGACAAAGTTACCACTTTTCGCACCGCCACCTTTGCGGGTTCAGGAACAAACATAATTCTACGAGACATGACGTTTGAGAACACGGCAGGACCAAATAAGCACCAAGCAGTAGCGTTACGGTTGAGTGCGGACCATGCAGTCGTATACCATTGCAACATCATTGGATATCAAGACACTCTCTATGTGCATTCTAACCGTCAATTCTTTCGGGAGTGCGACATCTACGGAACAATAGACTTCATCTTCGGCAACGCTGTAGTGGTTTTCCAAAGCTGCAACATCTACGCTCGAAAGCCAATGGCAGGACAAAAAAACACGATAACAGCACAAGACCGAAAAGACCCAAACCAAAACACAGGAATCTCAATTCACGCTTGCAAGATCATGGCCACGGGCGACCTTGAAGCGTCCAAGGGTTCTTTCCCCACATTTCTAGGTCGACCTTGGAAACTCTACTCTCGAGTGGTGTACATGGTGTCTTCCATGGGAGACCATATTCATCCACGTGGGTGGCTTGAGTGGCAAGGCTCTTTTGCTCTTGACACTCTTTATTACGGTGAGTATATGAATTCTGGGCCGGGGGCCGCCGTGGGGCAGCGGGTCAAGTGGCCGGGTTACCGAGTCATTACTTCCACAGTGGAAGCCTCCAAGTTTACCGTCGGCCAATTTATTTACGGTTCTTCTTGGTTGCCTTCTACCGGAGTCTCCTTCTCTGCTGGATTATCTACTAACTAA 1815 49.53 MNNNNSYNKLHTSHSANTTPAASFRLSGNDPPPPSSSLRRRSRILIISFMSVLLIAASVVSAAILVRSHMASSQSHFPHNKPSQAISRACSHTLYPSLCLSSLLSFPGSQSADVHDLVHISLNLTLQHLTKALYSTSQIPILQISKDPLAHSAYEDCMELLNDAIDAFSLSLFSTDASNHDIMTWLSAALTYHDTCTAGFQDVADLGVKDEVEAKLSDLSEMISNSLAIFSGFGGGDLPVENRKRRRLMETSTPSWAAENGGDHEGFPAWLSGKDRRLLAAPLSTIQADIVVAKDGSGKFKTVAEAIEAAPSSSGRRIIIYIKAGKYEEENLKVGRKKTNLMFVGDGKGVTVISGGKSVYDKVTTFRTATFAGSGTNIILRDMTFENTAGPNKHQAVALRLSADHAVVYHCNIIGYQDTLYVHSNRQFFRECDIYGTIDFIFGNAVVVFQSCNIYARKPMAGQKNTITAQDRKDPNQNTGISIHACKIMATGDLEASKGSFPTFLGRPWKLYSRVVYMVSSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFTVGQFIYGSSWLPSTGVSFSAGLSTN* 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15944062 15948402 + Chy9G171530.1 Chy09g01437 234334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01437 604 PANTHER PECTINESTERASE 37 601 - -
Chy09g01437 604 CDD PMEI-like_3 89 235 - -
Chy09g01437 604 PANTHER PECTINESTERASE 37 601 - -
Chy09g01437 604 SUPERFAMILY Pectin lyase-like 284 600 IPR011050 -
Chy09g01437 604 MobiDBLite consensus disorder prediction 1 38 - -
Chy09g01437 604 SMART PMEI_2 81 229 IPR006501 GO:0004857
Chy09g01437 604 TIGRFAM PME_inhib: pectinesterase inhibitor domain 61 231 IPR006501 GO:0004857
Chy09g01437 604 Pfam Pectinesterase 289 586 IPR000070 GO:0030599|GO:0042545
Chy09g01437 604 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Chy09g01437 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 233 IPR035513 -
Chy09g01437 604 MobiDBLite consensus disorder prediction 1 36 - -
Chy09g01437 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 84 231 IPR035513 -
Chy09g01437 604 Pfam Plant invertase/pectin methylesterase inhibitor 85 229 IPR006501 GO:0004857
Chy09g01437 604 Gene3D - 283 601 IPR012334 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g01208 Chy09g01437 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g01018 Chy-Chr9:12752095 Chy09g01437 Chy-Chr9:15944062 1.41E-155 dispersed
Chy12g00390 Chy-Chr12:4598161 Chy09g01437 Chy-Chr9:15944062 2.76E-136 dispersed
Chy06g01208 Chy-Chr6:10749051 Chy09g01437 Chy-Chr9:15944062 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01437 - - csv:101216816 1151.73