Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01458 ATGGCTTCCTCTCCTTTCACTCCCTCACACCACCTTCTTCTACCTTACTTTTCCACTTTACCCACTTTTCTCCTCCTATTTCTCCCAACACTCTTCCAAATTCAAGGAGTTAATGGTGGATCAATCGGAGTCAATTACGGCACGGTGGCTGACAATCTCCCTCCGCCCTCTAAAGTTGCAGCCTTCCTTTTGGATAACACAATTATCGATCGCGTCAGACTCTTCGATGCGGATCCCGACATCTTACGAGCTTTCGCTCATACCGGCATTTCAGTATCCATTACAATCCCTAATGATCAAATCCCCCGCTTAGTGAAGCCAAATTTCGCTGAAGAATGGATCAAATTCAACATTCAACCCTACATCCCTGCCACAAACATCATTCGCGTTCTAGTTGGCAATGAAGTCTTATCCACCGCCAATAAATTGCTCATTGCCAACCTCGTTCCAGCAATGCAGAGCCTCCACACAGCTCTCATTGAAGCCTCCTTGGATCGAAGGATTCAAATCTCAACACCCCACTCGCTCGGCATTTTGTCGAACTCAACCCCGCCGTCGACTGGAAGGTTCAGGCAAGGCTACGATACACACGTAATTAAACCAATGCTGAGCTTCCTAAGAGAAACAAACTCGCCATTAATGGTGAATCCATATCCATTCTTCGCCTGCACTGCTGAAAATCTAGATTACGCGCTCTTCCGGCCGAACCCCGGCGTGTTCGACTCGGATTTAGGAACTCTATACACCAATATGTTGGATGCTCAATTGGACGCAGTTTATTCCGCGATGAAAAGCTTGGGCTTTGAGGATCTCGATATTGTGATAGCCGAAACGGGCTGGCCTTCAAAGGGTGATCCAACCCAAGTTGGGGTCGGCCCAAAAGAAGCTGCTTATTACAATGGGAATCTGATGCGACATGTCGTATCAGGCAAAGGGACGCCGTTGATGCCGAACCGGACTTTCGAGACATACATTTTCGCTTTATTCAATGAGAATCTCAAACCGGGTCCAATTGGCGAAAGGAACTTTGGGCTATTCGAACCAGATCTGACCCCGGTTTATGAGATTGGGATTCTTCGGCCCACGGTAGCTGCCACAGCTCGAACCCACCCTAAAACGTTTTTGATAATCTTGATGGCTCAATCCGCTACTCCGAGAGCCCATCAAGGTCAAGTTGAAGGCCCAAGCCCAAGCACAGTGAGTGAAAGTAAAAGGTGGTGCCTACCCAAAAGTGAGGCCAGCGTGGAGGGCTTGCAGAGAAACATTGATTACGTTTGTGGGTTGGGCTTGGATTGTGGGCCGATCAAAGAAAATGGGGTGTGTTTTGCTCCTAATACGGTCCGAGCCCATGCTGCTTACGTCATGAACGCCTACTTTCAAGCCACGGAAGGGAACGATTTTGATTGCGATTTTGACCAAACTGGCGCTCTAACCACGGTGGATCCAATCATAAATGGCTTCGGATCCAAAGGTTCATCTTTTCGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGCTGGCTTGTTATCTCTGGGAAGAAGTATACCCATCCCAAGGTTGGCATGCTGTCGAAGACTTGGGGTTAACCAAAATGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCCACAAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATTGATCCTTCAACGGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAATCACAGCACAACCCAGATAAGACACCTGAGTTTGTGATCAAGATCTTGCAGTTTTTGGTTCCCATTTTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATAA 1914 46.71 MASSPFTPSHHLLLPYFSTLPTFLLLFLPTLFQIQGVNGGSIGVNYGTVADNLPPPSKVAAFLLDNTIIDRVRLFDADPDILRAFAHTGISVSITIPNDQIPRLVKPNFAEEWIKFNIQPYIPATNIIRVLVGNEVLSTANKLLIANLVPAMQSLHTALIEASLDRRIQISTPHSLGILSNSTPPSTGRFRQGYDTHVIKPMLSFLRETNSPLMVNPYPFFACTAENLDYALFRPNPGVFDSDLGTLYTNMLDAQLDAVYSAMKSLGFEDLDIVIAETGWPSKGDPTQVGVGPKEAAYYNGNLMRHVVSGKGTPLMPNRTFETYIFALFNENLKPGPIGERNFGLFEPDLTPVYEIGILRPTVAATARTHPKTFLIILMAQSATPRAHQGQVEGPSPSTVSESKRWCLPKSEASVEGLQRNIDYVCGLGLDCGPIKENGVCFAPNTVRAHAAYVMNAYFQATEGNDFDCDFDQTGALTTVDPIINGFGSKGSSFRRSGKAQQNQRLLACYLWEEVYPSQGWHAVEDLGLTKMVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIFIPSQQSQHNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE* 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16067861 16072290 + Chy9G171740.1 Chy09g01458 234355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01458 637 Gene3D Glycosidases 40 362 - -
Chy09g01458 637 Pfam X8 domain 406 475 IPR012946 -
Chy09g01458 637 Pfam Glycosyl hydrolases family 17 42 356 IPR000490 GO:0004553|GO:0005975
Chy09g01458 637 Gene3D - 508 587 IPR036400 -
Chy09g01458 637 ProSitePatterns Glycosyl hydrolases family 17 signature. 271 284 IPR000490 GO:0004553|GO:0005975
Chy09g01458 637 PRINTS Cytochrome B5 signature 533 543 IPR001199 -
Chy09g01458 637 PRINTS Cytochrome B5 signature 558 565 IPR001199 -
Chy09g01458 637 PRINTS Cytochrome B5 signature 543 557 IPR001199 -
Chy09g01458 637 PRINTS Cytochrome B5 signature 571 583 IPR001199 -
Chy09g01458 637 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 38 482 IPR044965 GO:0004553|GO:0005975
Chy09g01458 637 SMART Cyt_b5_2 510 584 IPR001199 -
Chy09g01458 637 SMART X8_cls 405 487 IPR012946 -
Chy09g01458 637 Gene3D - 398 490 - -
Chy09g01458 637 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 38 482 - -
Chy09g01458 637 Pfam Cytochrome b5-like Heme/Steroid binding domain 532 583 IPR001199 -
Chy09g01458 637 SUPERFAMILY (Trans)glycosidases 42 357 IPR017853 -
Chy09g01458 637 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 539 546 IPR018506 GO:0020037
Chy09g01458 637 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 521 584 IPR001199 -
Chy09g01458 637 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 531 590 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00551 Chy-Chr5:5995328 Chy09g01458 Chy-Chr9:16067861 7.47E-44 dispersed
Chy06g00372 Chy-Chr6:2493956 Chy09g01458 Chy-Chr9:16067861 1.58E-48 dispersed
Chy09g01458 Chy-Chr9:16067861 Chy12g00197 Chy-Chr12:2376102 0 dispersed
Chy11g01722 Chy-Chr11:23644474 Chy09g01458 Chy-Chr9:16067861 3.33E-21 dispersed
Chy10g00454 Chy-Chr10:10718944 Chy09g01458 Chy-Chr9:16067861 1.59E-56 transposed
Chy06g00069 Chy-Chr6:478771 Chy09g01458 Chy-Chr9:16067861 2.29E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01458 - - csv:101206625 887.486