Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01458 ATGGCTTCCTCTCCTTTCACTCCCTCACACCACCTTCTTCTACCTTACTTTTCCACTTTACCCACTTTTCTCCTCCTATTTCTCCCAACACTCTTCCAAATTCAAGGAGTTAATGGTGGATCAATCGGAGTCAATTACGGCACGGTGGCTGACAATCTCCCTCCGCCCTCTAAAGTTGCAGCCTTCCTTTTGGATAACACAATTATCGATCGCGTCAGACTCTTCGATGCGGATCCCGACATCTTACGAGCTTTCGCTCATACCGGCATTTCAGTATCCATTACAATCCCTAATGATCAAATCCCCCGCTTAGTGAAGCCAAATTTCGCTGAAGAATGGATCAAATTCAACATTCAACCCTACATCCCTGCCACAAACATCATTCGCGTTCTAGTTGGCAATGAAGTCTTATCCACCGCCAATAAATTGCTCATTGCCAACCTCGTTCCAGCAATGCAGAGCCTCCACACAGCTCTCATTGAAGCCTCCTTGGATCGAAGGATTCAAATCTCAACACCCCACTCGCTCGGCATTTTGTCGAACTCAACCCCGCCGTCGACTGGAAGGTTCAGGCAAGGCTACGATACACACGTAATTAAACCAATGCTGAGCTTCCTAAGAGAAACAAACTCGCCATTAATGGTGAATCCATATCCATTCTTCGCCTGCACTGCTGAAAATCTAGATTACGCGCTCTTCCGGCCGAACCCCGGCGTGTTCGACTCGGATTTAGGAACTCTATACACCAATATGTTGGATGCTCAATTGGACGCAGTTTATTCCGCGATGAAAAGCTTGGGCTTTGAGGATCTCGATATTGTGATAGCCGAAACGGGCTGGCCTTCAAAGGGTGATCCAACCCAAGTTGGGGTCGGCCCAAAAGAAGCTGCTTATTACAATGGGAATCTGATGCGACATGTCGTATCAGGCAAAGGGACGCCGTTGATGCCGAACCGGACTTTCGAGACATACATTTTCGCTTTATTCAATGAGAATCTCAAACCGGGTCCAATTGGCGAAAGGAACTTTGGGCTATTCGAACCAGATCTGACCCCGGTTTATGAGATTGGGATTCTTCGGCCCACGGTAGCTGCCACAGCTCGAACCCACCCTAAAACGTTTTTGATAATCTTGATGGCTCAATCCGCTACTCCGAGAGCCCATCAAGGTCAAGTTGAAGGCCCAAGCCCAAGCACAGTGAGTGAAAGTAAAAGGTGGTGCCTACCCAAAAGTGAGGCCAGCGTGGAGGGCTTGCAGAGAAACATTGATTACGTTTGTGGGTTGGGCTTGGATTGTGGGCCGATCAAAGAAAATGGGGTGTGTTTTGCTCCTAATACGGTCCGAGCCCATGCTGCTTACGTCATGAACGCCTACTTTCAAGCCACGGAAGGGAACGATTTTGATTGCGATTTTGACCAAACTGGCGCTCTAACCACGGTGGATCCAATCATAAATGGCTTCGGATCCAAAGGTTCATCTTTTCGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGCTGGCTTGTTATCTCTGGGAAGAAGTATACCCATCCCAAGGTTGGCATGCTGTCGAAGACTTGGGGTTAACCAAAATGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCCACAAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATTGATCCTTCAACGGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAATCACAGCACAACCCAGATAAGACACCTGAGTTTGTGATCAAGATCTTGCAGTTTTTGGTTCCCATTTTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATAA 1914 46.71 MASSPFTPSHHLLLPYFSTLPTFLLLFLPTLFQIQGVNGGSIGVNYGTVADNLPPPSKVAAFLLDNTIIDRVRLFDADPDILRAFAHTGISVSITIPNDQIPRLVKPNFAEEWIKFNIQPYIPATNIIRVLVGNEVLSTANKLLIANLVPAMQSLHTALIEASLDRRIQISTPHSLGILSNSTPPSTGRFRQGYDTHVIKPMLSFLRETNSPLMVNPYPFFACTAENLDYALFRPNPGVFDSDLGTLYTNMLDAQLDAVYSAMKSLGFEDLDIVIAETGWPSKGDPTQVGVGPKEAAYYNGNLMRHVVSGKGTPLMPNRTFETYIFALFNENLKPGPIGERNFGLFEPDLTPVYEIGILRPTVAATARTHPKTFLIILMAQSATPRAHQGQVEGPSPSTVSESKRWCLPKSEASVEGLQRNIDYVCGLGLDCGPIKENGVCFAPNTVRAHAAYVMNAYFQATEGNDFDCDFDQTGALTTVDPIINGFGSKGSSFRRSGKAQQNQRLLACYLWEEVYPSQGWHAVEDLGLTKMVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIFIPSQQSQHNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE* 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16067861 16072290 + Chy9G171740.1 Chy09g01458 234355

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01458 637 Gene3D Glycosidases 40 362 - -
Chy09g01458 637 Pfam X8 domain 406 475 IPR012946 -
Chy09g01458 637 Pfam Glycosyl hydrolases family 17 42 356 IPR000490 GO:0004553|GO:0005975
Chy09g01458 637 Gene3D - 508 587 IPR036400 -
Chy09g01458 637 ProSitePatterns Glycosyl hydrolases family 17 signature. 271 284 IPR000490 GO:0004553|GO:0005975
Chy09g01458 637 PRINTS Cytochrome B5 signature 533 543 IPR001199 -
Chy09g01458 637 PRINTS Cytochrome B5 signature 558 565 IPR001199 -
Chy09g01458 637 PRINTS Cytochrome B5 signature 543 557 IPR001199 -
Chy09g01458 637 PRINTS Cytochrome B5 signature 571 583 IPR001199 -
Chy09g01458 637 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 38 482 IPR044965 GO:0004553|GO:0005975
Chy09g01458 637 SMART Cyt_b5_2 510 584 IPR001199 -
Chy09g01458 637 SMART X8_cls 405 487 IPR012946 -
Chy09g01458 637 Gene3D - 398 490 - -
Chy09g01458 637 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 38 482 - -
Chy09g01458 637 Pfam Cytochrome b5-like Heme/Steroid binding domain 532 583 IPR001199 -
Chy09g01458 637 SUPERFAMILY (Trans)glycosidases 42 357 IPR017853 -
Chy09g01458 637 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 539 546 IPR018506 GO:0020037
Chy09g01458 637 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 521 584 IPR001199 -
Chy09g01458 637 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 531 590 IPR036400 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01458 - - - csv:101206625 887.486
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00551 Chy-Chr5:5995328 Chy09g01458 Chy-Chr9:16067861 7.47E-44 dispersed
Chy06g00372 Chy-Chr6:2493956 Chy09g01458 Chy-Chr9:16067861 1.58E-48 dispersed
Chy09g01458 Chy-Chr9:16067861 Chy12g00197 Chy-Chr12:2376102 0 dispersed
Chy11g01722 Chy-Chr11:23644474 Chy09g01458 Chy-Chr9:16067861 3.33E-21 dispersed
Chy10g00454 Chy-Chr10:10718944 Chy09g01458 Chy-Chr9:16067861 1.59E-56 transposed
Chy06g00069 Chy-Chr6:478771 Chy09g01458 Chy-Chr9:16067861 2.29E-24 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g991 . . . Bda07g01952 . . . Bma14g02023 . . Cma02g01139 Cma15g01010 Car02g00943 Car15g00942 . Cpe05g00584 . . . . . . . . Cla01g00023 Cam01g0022 Cec01g0020 Cco01g0024 Clacu01g0023 Cmu01g0022 Cre09g2485 Cone1ag1008 Cone5ag0716 . . . Csa05g00025 Chy09g01458 . . Blo09g00007 . . . . . . . Cmo02g01170 Cmo15g01073 . . . . . Cpe13g00327 Bhi12g00682 . . . Hepe06g0817 . . . . . . . . . Lsi09g00003 . . Cme09g02007
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy06g00372 . 1 133 NADPH P450 reductases AT5G53560 68.4 1.4e-51 199.1
Chy05g00551 . 1 135 NADPH P450 reductases AT5G53560 65.9 9.9e-50 193.0
Chy04g00851 . 4 134 NADPH P450 reductases AT5G53560 63.4 1.5e-45 179.1
Chy09g01458 . 527 638 NADPH P450 reductases AT5G53560 74.1 8.1e-44 173.3
Chy06g00372 . 1 132 NADPH P450 reductases AT5G48810 64.9 7.4e-48 186.8
Chy05g00551 . 1 134 NADPH P450 reductases AT5G48810 62.5 1.3e-47 186.0
Chy04g00851 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.7e-44 175.6
Chy06g00372 . 22 135 NADPH P450 reductases AT2G32720 84.2 5.2e-51 197.2
Chy05g00551 . 13 135 NADPH P450 reductases AT2G32720 73.4 4.2e-48 187.6
Chy04g00851 . 21 132 NADPH P450 reductases AT2G32720 69.6 1.1e-40 162.9
Chy09g01458 . 533 636 NADPH P450 reductases AT2G32720 68.3 3.0e-38 154.8
Chy03g00719 . 1 130 NADPH P450 reductases AT1G26340 54.5 6.7e-38 153.7
Chy08g00202 CCT 2 282 NADPH P450 reductases AT5G17770 81.5 2.2e-131 465.3
Chy04g01700 CCT 2 281 NADPH P450 reductases AT5G17770 76.4 4.4e-124 441.0
Chy05g00027 . 6 279 NADPH P450 reductases AT5G17770 75.2 3.9e-117 417.9
Chy06g00372 . 1 133 NADPH P450 reductases AT5G53560 68.4 1.4e-51 199.1
Chy05g00551 . 1 135 NADPH P450 reductases AT5G53560 65.9 9.9e-50 193.0
Chy04g00851 . 4 134 NADPH P450 reductases AT5G53560 63.4 1.5e-45 179.1
Chy09g01458 . 527 638 NADPH P450 reductases AT5G53560 74.1 8.1e-44 173.3
Chy06g00372 . 1 132 NADPH P450 reductases AT5G48810 64.9 7.4e-48 186.8
Chy05g00551 . 1 134 NADPH P450 reductases AT5G48810 62.5 1.3e-47 186.0
Chy04g00851 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.7e-44 175.6
Chy06g00372 . 22 135 NADPH P450 reductases AT2G32720 84.2 5.2e-51 197.2
Chy05g00551 . 13 135 NADPH P450 reductases AT2G32720 73.4 4.2e-48 187.6
Chy04g00851 . 21 132 NADPH P450 reductases AT2G32720 69.6 1.1e-40 162.9
Chy09g01458 . 533 636 NADPH P450 reductases AT2G32720 68.3 3.0e-38 154.8
Chy03g00719 . 1 130 NADPH P450 reductases AT1G26340 54.5 6.7e-38 153.7
Chy08g00202 CCT 2 282 NADPH P450 reductases AT5G17770 81.5 2.2e-131 465.3
Chy04g01700 CCT 2 281 NADPH P450 reductases AT5G17770 76.4 4.4e-124 441.0
Chy05g00027 . 6 279 NADPH P450 reductases AT5G17770 75.2 3.9e-117 417.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013643 0 1 1 1 2 0 1 0 0 1 1 1 0 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 2 1 26