Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01463 ATGGCTTCCTCCACACTCAGCCCCTCCTGCTTCGGATCCTTCGCCGCGGCCGCATCCAACAAGACTTCCTATTCTTCTCCGGCGGCTTTCAAGCCACTCAAGCTTCCTCTCTTTTGGCCATGGCAGAAGGTAAAAATGGGCCCTCTGAGTGTTTCCCCTATGGGATTTGGAACTTGGGCGTGGGGGAACCAGCTCTTGTGGGGCTACCAGGAATCTATGGACTCTGAGCTTCAACACATTTTCAATTTGGCTGTGGATAATGGAATCAATCTCTTCGACACCGCGGATTCTTATGGCACTGGAAGATTGAATGGCCAAAGCGAAAAGCTACTTGGAAAATTTATCCGACAGTCTCAAGTTAAAAATGACATTGTGATAGCCACCAAGTTTGCAGCATATCCATGGCGCCTAACACCTGCACAGTTTGTCAAAGCTTGCCAGGGGTCTTTGGAGCGAATGCAGATTGAAAAAATTGGTATAGGACAATTACATTGGTCAACAGCAAACTATGCTCCTTTACAGGAGATGGCTCTTTGGGATGGACTAGTGGCAATGTATGATAAGGGATTAGTTCAAGCAGTTGGAGTAAGCAACTATGGACCAAAGCAACTAGTAAGGATACATGACTACCTAAATGACCGAGGAGTTCCCTTATGCACTGCTCAGGTGCAATTTTCTTTGCTGAGCATAGGCGATGATCAGCTGGAGATTAAGAAGACATGTGATTCTTTGGGCATTCGCTTAATAGCTTACAGTCCTCTGGGATTGGGAATGCTTACAGGAAAATACTCACCTTCCAAGCTTCCATCTGGACCTCGAGGTTTGCTATTCAGGCAAATTCTACCAGGATTGGAACCACTACTGACTACACTTGGAGACATTGCAGAGAAAAGACGCAAAACAATACCACAAGTCGCCATAAACTGGTGCATATCTAAAGGGACCATACCCATACCTGGAGCTAAGACATTAAAACAAGCTCAGGAAAATTTGGGTGCTCTAGGCTGGAACCTTACTCAAGAGGAATTGAACCTGTTGGACGATGGAGCTCGAGAGTCCCCTCGAAAGATGATACAGAATATTTTCCAGACAAGGTGGTTTAAGTTTAACTTCAATCTTACAGTAAACTTAGCTGCACCAAGAGGCGCCCTAGGAGAAGCTGGTGATTATAGCTCACAAGGGCTGTTAGTTGAGTTGAAATTGGATACTGCTGTGGAGACTCCCAAGGGATGTTTGGCCATTCTTGTTGGCCAAGAGCAACAGCGGTTCGTCATTCCTGTCATTTATGTCAACCATCCTTTATTTGTTCAGCTCTTGAAGGAGGCCGAGGACGAGTATGGCTTCGATCAGAAAGGACCTATCTCTATTCCTTGCCCTGTCGACGACTTTCGCACCCTTCAGGGCATTATTCACCATGATCACCATCACCACCATCTTCCTGTCTCCTGTTTCAGGGATTCTTCTCATTCCCATTGCTGA 1479 46.18 MASSTLSPSCFGSFAAAASNKTSYSSPAAFKPLKLPLFWPWQKVKMGPLSVSPMGFGTWAWGNQLLWGYQESMDSELQHIFNLAVDNGINLFDTADSYGTGRLNGQSEKLLGKFIRQSQVKNDIVIATKFAAYPWRLTPAQFVKACQGSLERMQIEKIGIGQLHWSTANYAPLQEMALWDGLVAMYDKGLVQAVGVSNYGPKQLVRIHDYLNDRGVPLCTAQVQFSLLSIGDDQLEIKKTCDSLGIRLIAYSPLGLGMLTGKYSPSKLPSGPRGLLFRQILPGLEPLLTTLGDIAEKRRKTIPQVAINWCISKGTIPIPGAKTLKQAQENLGALGWNLTQEELNLLDDGARESPRKMIQNIFQTRWFKFNFNLTVNLAAPRGALGEAGDYSSQGLLVELKLDTAVETPKGCLAILVGQEQQRFVIPVIYVNHPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHDHHHHHLPVSCFRDSSHSHC* 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16091502 16099670 + Chy9G171790.1 Chy09g01463 234360

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01463 492 PRINTS Aldo-keto reductase signature 84 108 IPR020471 GO:0016491
Chy09g01463 492 PRINTS Aldo-keto reductase signature 148 166 IPR020471 GO:0016491
Chy09g01463 492 PRINTS Aldo-keto reductase signature 182 199 IPR020471 GO:0016491
Chy09g01463 492 Pfam Aldo/keto reductase family 53 347 IPR023210 -
Chy09g01463 492 Gene3D - 43 354 IPR036812 -
Chy09g01463 492 CDD AKR_AtPLR-like 51 347 - -
Chy09g01463 492 ProSitePatterns Aldo/keto reductase family signature 2. 182 199 IPR018170 GO:0016491
Chy09g01463 492 SUPERFAMILY NAD(P)-linked oxidoreductase 49 349 IPR036812 -
Chy09g01463 492 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 31 359 - -
Chy09g01463 492 PANTHER PYRIDOXAL REDUCTASE, CHLOROPLASTIC 31 359 - -
Chy09g01463 492 Pfam Auxin responsive protein 405 466 IPR003676 GO:0009733
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01463 K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] - csv:101218000 729.939
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00538 Chy-Chr7:4525005 Chy09g01463 Chy-Chr9:16091502 4.40E-75 dispersed
Chy07g00539 Chy-Chr7:4532500 Chy09g01463 Chy-Chr9:16091502 3.09E-15 dispersed
Chy09g01463 Chy-Chr9:16091502 Chy11g01737 Chy-Chr11:23775281 1.83E-28 dispersed
Chy11g01813 Chy-Chr11:24477798 Chy09g01463 Chy-Chr9:16091502 4.81E-15 dispersed
Chy01g00187 Chy-Chr1:1270751 Chy09g01463 Chy-Chr9:16091502 9.46E-13 transposed
Chy06g00804 Chy-Chr6:5646641 Chy09g01463 Chy-Chr9:16091502 2.69E-19 transposed
Chy06g01427 Chy-Chr6:15041888 Chy09g01463 Chy-Chr9:16091502 3.32E-21 transposed
Chy10g00014 Chy-Chr10:361143 Chy09g01463 Chy-Chr9:16091502 9.90E-27 transposed
Chy06g00066 Chy-Chr6:443121 Chy09g01463 Chy-Chr9:16091502 2.81E-27 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g984 Blo06g01052 . . . . . . . . . Cma02g01144 Cma15g01004 . Car15g00938 . Cpe05g00581 . . . . . . . . Cla01g00017 . . . . . . Cone14ag0451 Cone15ag0481 . Cone18ag0993 . Csa05g00018 Chy09g01463 . . . . Bda15g00796 . Bpe12g00336 Bma08g00398 . . Cmo02g01175 . . . . . . Cpe13g00332 . . . . . . . . . . . . . . . . . Cme09g02014
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 29