Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy09g01472 ATGGGGGAGGCCGTGGTCCTGAGCTCTGAGGATGTGGATGTGGATATTGATTATGTCAGGCTCCACAACGACGATATGGCAGATGCAGAGAGTATGGGCACTCACAGACCTAACAGAGACGGCAGTTCAAGTGGATTTGGGATCGGGATTAAGTGGGAGCGCTTCTTGCCCAAGATGATGCTCAGGGTTTTGCTCGTTGAAGCCGACGATTCCACCAGACAGATTATCACTGCCCTCCTCCGCAAGTGCTGCTACCGAGTTGCTGCTGTTCCTGATGGCTTGAAAGCATGGGAAATTCTCAAAGAAAGGCCCCGTAATGTAGATCTTATATTGGCAGAAGTTGAATTGCCGTCAATCTCTGGATTTGCTCTCCTAACTCTGATCATGGAGCACGAGACTTGCAAAAATATTCCTGTTATAATGATGTCCTCCGAAGATTCTATCAGCACTGTTTACAAATGCATGATGAAAGGTGCAGCAGACTATCTTGTCAAGCCCTTAAGGAGAAATGAGCTGAGAAACCTGTGGCAACATGTTTGGAGAAGACAAGCGTCATCCAATGTGAGAGCTGACGTTCAAGAAAAGGTTGAAGTCACTTCAGAAAATGAGACTGCAAGCAATCACTCAACTGGTTATGTTGCTGGAGTTCAGAGGAATAACAAAAACATTGAGAAAGGAAGTGATACTCAGAGCTCCTGCACAAAGGTAGATTTCGAACCTGGAAATAAGATACAGGAAAATTCACAGTCTAGGCAGGGAAAAGCCTCTCCCAACGACTTCAAGCCACAAAAAGATGAACGTCACATCAATTTGAGTCAAAGATTGTTTATGCATGAAAATGAAACTGGAGGATTAGCAATGAGTTGCTATGTCAATACTAATTTACCAATCACACTAAGCATGGGTCTTGAGCCAATCAATGATGGGAGAAGTCCTAATATTGCCAGTGAAGCGGGTGATGATACGGATCTGCTTGCCAACCCATCCAGAGATGCAACTGCCTCGAATCATGCCTGTATCAAGTATCCCAATAACTACCAAAAAATTTCTCCTTCCAACAATTTTGCCGCAAACAATTTCGGCTCTGCTCTTCATTTGGATCTTTCCCTGAGAAGATGTCAACCTAACGATTTTGAGGAGCGTGCTGCAGGACAGGCTACCCTCAAACATTCTAGTGCTTCAGCTTTTACAAGATACACTTTCAGGCCGTTGCAATCACTTCAAGCAAAATCAAGCAGCATCTGTGATGAGCAAAAGGAAATTGAAAGCAACCCTGATCATGTTGGAAGTATCGGTGCTACTTCTACCTCTGATACCATTAATCCCACGCCAAATCTTCAAAAGAGTAATACTTCTATGCCTATGATCACGAGTCAATCTACTCAGTCTGAAGTTGCTAAATCAAGTACGTCAGAGACGGCAATCCCTCTTCAAGTTTCAGGGACAGATTTGATGTCTAATAATCAACGAGCAGGCTCAGGCCATGGCTCTTTACCTTCTCACAACTTCTGCGCACAACTGGGTAGCCCATCATCTCCATGCCGAACTTCAGTCACCCATCCAGAACTCATCTTTGGAAAACAGACGGTTTATCCTTTAAACCTTGAGAATCATAAATTGGAGCAATTTCTGAACCAGCATCGCAGCTTAATCAGTCCAGCAAGCAGAAAGATAGAGAATTCTGGCCAGTCTCCGGAAAACCAAGGCCATATTGGAAGCCTGGGATATCCTAGCCCCTGCGGAAGCAACAGCAATGTAGATCGAGTTGGCATTGCAGGGGTTACATCTGAGAGTAGAAATGAAGAAGCTTTGTTTTCTCAAGGAGGAGATTCTTATCGGTCCAGTCAAAGAGAAGCAGCTCTAACAAAGTTCCGACTGAAAAGAAAAGATAGATGTTATGAGAAAAAGGTCCGTTATGAGAGTAGAAAAAAGCTGGCAGAGCAGCGTCCGAGAGTGAAGGGACAGTTTGTCCGGAGAGTATTGACTGATCCATTGCCTACAGAAACCAATGACAATACATCCAACGTGTGGAACTCAGCCTCTAAACTCGCTTTTCCTCGGCAAGATACTCCGCTAATTCAGCGACATCCTGATTTCAAATTAAAGTTGGTGAGAGATGGGAATGGGACTTCTCCAATTTTGCCTGCAAATTAA 2154 44.29 MGEAVVLSSEDVDVDIDYVRLHNDDMADAESMGTHRPNRDGSSSGFGIGIKWERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSISGFALLTLIMEHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVWRRQASSNVRADVQEKVEVTSENETASNHSTGYVAGVQRNNKNIEKGSDTQSSCTKVDFEPGNKIQENSQSRQGKASPNDFKPQKDERHINLSQRLFMHENETGGLAMSCYVNTNLPITLSMGLEPINDGRSPNIASEAGDDTDLLANPSRDATASNHACIKYPNNYQKISPSNNFAANNFGSALHLDLSLRRCQPNDFEERAAGQATLKHSSASAFTRYTFRPLQSLQAKSSSICDEQKEIESNPDHVGSIGATSTSDTINPTPNLQKSNTSMPMITSQSTQSEVAKSSTSETAIPLQVSGTDLMSNNQRAGSGHGSLPSHNFCAQLGSPSSPCRTSVTHPELIFGKQTVYPLNLENHKLEQFLNQHRSLISPASRKIENSGQSPENQGHIGSLGYPSPCGSNSNVDRVGIAGVTSESRNEEALFSQGGDSYRSSQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRVLTDPLPTETNDNTSNVWNSASKLAFPRQDTPLIQRHPDFKLKLVRDGNGTSPILPAN* 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 16142628 16149660 - Chy9G171880.1 Chy09g01472 234369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy09g01472 717 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 45 651 - -
Chy09g01472 717 MobiDBLite consensus disorder prediction 421 471 - -
Chy09g01472 717 MobiDBLite consensus disorder prediction 197 257 - -
Chy09g01472 717 Pfam Response regulator receiver domain 63 174 IPR001789 GO:0000160
Chy09g01472 717 Gene3D - 59 250 - -
Chy09g01472 717 PANTHER TWO-COMPONENT RESPONSE REGULATOR 45 651 IPR045279 GO:0009736
Chy09g01472 717 ProSiteProfiles Response regulatory domain profile. 62 180 IPR001789 GO:0000160
Chy09g01472 717 MobiDBLite consensus disorder prediction 197 266 - -
Chy09g01472 717 MobiDBLite consensus disorder prediction 428 471 - -
Chy09g01472 717 Pfam CCT motif 617 659 IPR010402 GO:0005515
Chy09g01472 717 ProSiteProfiles CCT domain profile. 617 659 IPR010402 GO:0005515
Chy09g01472 717 SUPERFAMILY CheY-like 55 185 IPR011006 -
Chy09g01472 717 MobiDBLite consensus disorder prediction 555 579 - -
Chy09g01472 717 SMART REC_2 61 176 IPR001789 GO:0000160
Chy09g01472 717 CDD psREC_PRR 63 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00806 Chy-Chr8:15638507 Chy09g01472 Chy-Chr9:16142628 2.17E-18 dispersed
Chy09g01472 Chy-Chr9:16142628 Chy12g01526 Chy-Chr12:19020856 1.61E-14 dispersed
Chy10g01363 Chy-Chr10:17856425 Chy09g01472 Chy-Chr9:16142628 3.85E-14 dispersed
Chy11g02009 Chy-Chr11:25955531 Chy09g01472 Chy-Chr9:16142628 1.30E-06 dispersed
Chy09g01472 Chy-Chr9:16142628 Chy11g01546 Chy-Chr11:22011151 2.08E-23 transposed
Chy09g01472 Chy-Chr9:16142628 Chy02g02099 Chy-Chr2:25279827 1.81E-23 transposed
Chy09g01472 Chy-Chr9:16142628 Chy05g01262 Chy-Chr5:16978136 2.09E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18536 PF00072 Response_reg 7.30E-21 CL0304 Chy TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy09g01472 K12130 - csv:101209788 1290.79