Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00056 ATGGGTCTCTACTTCTTCCTCTCTACAATGCCCATTTCAAGCCTTTTTCTCCTCTTCGCTTTTCTTTCTCTGTTTCTCTCAACCCTTTCCACCGCCGCTGACCGGAACTTCCTCCTCCTCCACCACCACCGTCATCACCGCCACCTTCTCCACCAACCCTTTTTCCCATGGACTTCTTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGTCTCAACCACAGCACCTACAGCCTAAACTCCCCTTTTCTTCTAACTCATTTTCCTCACCCCCTAAACCCTTTTTTCCATCCTACCCTTCCTCGCCACCGCCGCCTCCCTCGCCTCCTTCGACGGCGCTTCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTCCCGCAGCCTACTTCTTCTTCCCAGCACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTTTCTGTTCTTGTTTTTTTCGTTGCTCTGTTTTTCTACTATCGAAACCGGAACCGACAAGTCTCTGCTACTGACAAGGCCTCTAGAACTGATAATCTTCGGCTCTACCCTCCGAATATTGACACTTCTGATGGAGTTCATAAGAACAGAGCCTCTTCCACTACCACCTCCAAGTTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAAGAGGCTGCTGGAACCGTGGAGGAGGGTGGTGGCGGAATCGTCGAGTCTGTTTCTCCAGTGAAAATGGGGTCGCCGGAGCTGAATCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCAGACGATTATCGGAGGAATGCTGATGGTAATGATGATGATGATGATGATGATGACTACGATCGCGACGACGAAGAGTTTTTTTCACCAAGAGGGTCTTCCGTCGGCGGTAAGGAGAATGTGGGGAGTAATAGAAGATTGAGCCCCGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTTTTGAGGAAAAGCTATAATTCCAGTTTGAATTCTGGTTCTCCCTCTGTTTCTCTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACTAGCTTGAGATCAAAGTCTCCGGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCATTGTCAACGCTTCCAGTACCACCATCACCGTCGTTCTCCTCTGCTTCTTCGCCACTGGGAGGTTCTGGGAACACCAAGAACTCGCCATCGAGGGATTTTGATTTGCCGGAGCTGCCTCGGCAGTTTTCAGATGGATCTAGGATGGATTACCAGCAACCATTGCCAGTGAAACTACCAACAGCCCCTCCTCTGCGTCCGCCACCGCCACCTCCTCCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCAGTACTCACCGTGCCAACAAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAATCAAACACCATTGTAGATGCAGAGAGAACGGAAGAAACTTTGAAGCCGAAACTGAAGGCATTGCATTGGGACAAAGTTCGGATGAGCTCTGATCGAGCAATGGTGTGGGATCAGATCAAATCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAATAATAATTCCAATATTATGAGCAAAGAAAATGGTAGTGTTCATCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATAGAAGAAGTCTTGGAAGCCCTTTTGGAAGGAAACTCAGATGCTTTGTGTACTGAACTGCTCGAAAGTTTACTGAAAATGGCGCCAACTGAAGAAGAAGAGCGTAGTTTGAAAGAATACAAAGACGATTCACCTTTTAAACTTGGACCAGCTGAGAAATTTCTCAAGGTAGTTCTTGATATACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATGGCCAATTTCGATTCTGAGGTTGAGTACCTCATTCGGTCCTTTACAACTCTTGAGGCTGCTTGTACAGAATTGAAGAACAGCAGAATGTTTCTCAAGCTTCTTGAAGCAGTGCTCAAAACTGGGAACCGGATGAATGTAGGCACGGATAGAGGCGACGCACATGCTTTTAAACTTGACACTCTTCTCAAGCTTGTTGATATCAAGGGCACTGATGGAAAAACTACTCTCTTGCATTTTGTAGTACAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCCGACAACAACCTGACAGCTGATAATACTCAGCAATCTTCCTTGACAAATGATGTCGAGTTTCGAAAGCTTGGTCTTCAAGTCGTTTCGGGTCTTAGTAGGGAGCTATCCAATGTGAAAAAAGCTGCATTAATGGATGCAGATGTACTTATCCACGATGTAGGGAAACTTGCTGGAGGGATCACAAAAATCACAGAGGTCATTAGATTGAATGAAGACATGCTGAAAGGAGGAAGTCAGTCGAATTTCTCTGACGCCATGAACAAGTTCTTGGGGAAGGCAGCAGAAGAAGTATCAAGGATACAAGTTCAAGAAGGCATTGTCCTCACCATGGTAAAGGAAATAACCGAATACTTCCATGGAAACCTAGCAAAAGAAGAAGCTCGGCCGCTGCGCATTTTTATGGTGGTAAAGGATTTTCTTGCCATCTTAGATCAGGTATGCAAAGAAGTCGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTATGAATCCATGTCTTCCATCGGTTTTCCCTGGATTATGCGAAAGCCAGCGCTATGGTTCGTCTGATGACGATAGTTCATCTTCCTCATCATAG 2886 45.67 MGLYFFLSTMPISSLFLLFAFLSLFLSTLSTAADRNFLLLHHHRHHRHLLHQPFFPWTSLPPSQAPSSLSPLSQPQHLQPKLPFSSNSFSSPPKPFFPSYPSSPPPPPSPPSTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFFVALFFYYRNRNRQVSATDKASRTDNLRLYPPNIDTSDGVHKNRASSTTTSKFLYLGTLATSREIDEEAAGTVEEGGGGIVESVSPVKMGSPELNPLPPLPRRNFADDYRRNADGNDDDDDDDDYDRDDEEFFSPRGSSVGGKENVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSLPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLSTLPVPPSPSFSSASSPLGGSGNTKNSPSRDFDLPELPRQFSDGSRMDYQQPLPVKLPTAPPLRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPTRPILSQNIAHMSAGEQSNTIVDAERTEETLKPKLKALHWDKVRMSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSNIMSKENGSVHQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVLEALLEGNSDALCTELLESLLKMAPTEEEERSLKEYKDDSPFKLGPAEKFLKVVLDIPFAFKRVDAMLYMANFDSEVEYLIRSFTTLEAACTELKNSRMFLKLLEAVLKTGNRMNVGTDRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDNNLTADNTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLIHDVGKLAGGITKITEVIRLNEDMLKGGSQSNFSDAMNKFLGKAAEEVSRIQVQEGIVLTMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPMNPCLPSVFPGLCESQRYGSSDDDSSSSSS* 962
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1398601 1402076 - Chy10G172500.1 Chy10g00056 234431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00056 961 MobiDBLite consensus disorder prediction 381 404 - -
Chy10g00056 961 MobiDBLite consensus disorder prediction 271 286 - -
Chy10g00056 961 MobiDBLite consensus disorder prediction 378 453 - -
Chy10g00056 961 PANTHER FORMIN-RELATED 35 958 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Chy10g00056 961 MobiDBLite consensus disorder prediction 329 360 - -
Chy10g00056 961 PANTHER FORMIN-LIKE PROTEIN 2 35 958 - -
Chy10g00056 961 SMART it6_source 498 921 IPR015425 -
Chy10g00056 961 MobiDBLite consensus disorder prediction 226 308 - -
Chy10g00056 961 SUPERFAMILY Formin homology 2 domain (FH2 domain) 439 919 - -
Chy10g00056 961 Gene3D Formin, FH2 domain 496 916 IPR042201 -
Chy10g00056 961 ProSiteProfiles Formin homology-2 (FH2) domain profile. 498 932 IPR015425 -
Chy10g00056 961 Pfam Formin Homology 2 Domain 500 906 IPR015425 -
Chy10g00056 961 MobiDBLite consensus disorder prediction 429 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00807 Chy-Chr4:10513486 Chy10g00056 Chy-Chr10:1398601 3.58E-18 dispersed
Chy10g00056 Chy-Chr10:1398601 Chy11g00235 Chy-Chr11:2211403 4.96E-173 dispersed
Chy10g00056 Chy-Chr10:1398601 Chy12g01523 Chy-Chr12:18995713 8.42E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00056 - - csv:101213912 1466.83