Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00144 ATGTGGGTTGACTCTCCCTTGTTGGGGGAAAGTATGGAAATTGAAGAACAGTTCAATAGTGCTCCCATGAATATGATTGAAAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATACGAGATTGAAGAAGTTGTTGGTAAAGGGAGCTATGGAGTTGTGGCATCTGCCATTGACACTCATTCTGGTGAGAAAGTTGCTATCAAGAAGATAAATAATGTGTTTGAGCATGTTTCTGATGCCACGCGGATTCTAAGAGAAATTAAGCTTCTTCGGTTTCTTCGACATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCCGAAGGGAGTTCAAAGATTTATACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTAAAGACTAATGATGATCTCACTCCTCAGCATCATCAATTTTTCTTATATCAACTTCTTAGAGCATTGAAGTATATACATTCAGCTCATGTGTTCCATAGAGATTTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGACTTGCACGTGCATCTTTCAGTGATGCCCCGTCTGCTATATTTTGGACTGATTATGTCGCTACCCGATGGTACCGTGCTCCTGAACTTTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCAAGCAAGCCTTTGTTCCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACTTACTTGGTACCCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGGTATTTGAGTGGCATGAGAAAAAAAGATCCAATACCTCTATCGAAAAAGTTTCCTAATGCAGACCCACTAGCTCTTCGTTTACTTGAACGTCTGCTTGCATTTGATCCTGATGATCGCCCTTCTGCTGAGGAGGCATTAGCTGATCCTTATTTCCGTGGACTGGCTAATCTGAAGGATGAACCATCCAGGCAACCCATTTCAAAACTCGAGTTTGAGTTTGAAAAGAGAAAGTTGACCAAAGATGACGTCAGGGAACTTATATATAGAGAAATTTTGGAGTATCACCCTCAAATGCTTAAGGAATACCTTCAAGGCTCTGGGAGCCACTTTTTGTATCCCAGTGGAATTGACCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCACTTCTAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATATACACTGGGATATGAAGATGATGATGATGAAAAACATAGAACAGAATACCGAAATGCAGCTTCAATTGAACGTGCAGCAGTTCATAGCCCTCCTGGACCTGCTTATCCATTAACTGCTCGGAACGATTGCAATAGTTATAACCTGTTGAGGAGTGCTAGTATAAGTTGTTCTAAATGGGTGGATTAA 1482 40.62 MWVDSPLLGESMEIEEQFNSAPMNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHIMLPPSRREFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKDPIPLSKKFPNADPLALRLLERLLAFDPDDRPSAEEALADPYFRGLANLKDEPSRQPISKLEFEFEKRKLTKDDVRELIYREILEYHPQMLKEYLQGSGSHFLYPSGIDRFKRQFDHLEERSGKGERGSPLLRKHASLPRERIYTLGYEDDDDEKHRTEYRNAASIERAAVHSPPGPAYPLTARNDCNSYNLLRSASISCSKWVD* 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3841547 3846861 - Chy10G173380.1 Chy10g00144 234519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00144 493 Gene3D Phosphorylase Kinase; domain 1 56 377 - -
Chy10g00144 493 SMART serkin_6 40 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00144 493 ProSiteProfiles Protein kinase domain profile. 40 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00144 493 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy10g00144 493 SUPERFAMILY Protein kinase-like (PK-like) 37 336 IPR011009 -
Chy10g00144 493 Pfam Protein kinase domain 40 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00144 493 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 435 - -
Chy10g00144 493 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 435 - -
Chy10g00144 493 CDD STKc_TDY_MAPK 39 376 - -
Chy10g00144 493 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Chy10g00144 493 Gene3D Transferase(Phosphotransferase) domain 1 126 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00144 Chy-Chr10:3841547 Chy11g01438 Chy-Chr11:21183907 0 dispersed
Chy10g00144 Chy-Chr10:3841547 Chy02g02318 Chy-Chr2:27194904 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71492 PF00069 Pkinase 7.10E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00144 - - csv:101204645 927.932