Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00188 ATGGCATCAGGGGTGTTGGTTTTGGTCTTTGCTTGTTTCCTCGGATCATTCCCTCAAAATTCTTCTCAATCTATTACAGATCCTCATCAAGAGCAAACTCTGAACTCCATATTTAGACAATGGAATATATTCGCGCCTAACAATACAAAGAAAAACGGGGTAAGATTTCAGAGTTGGAATATTAGCGGCAACCTCTGCACTGGGATTGCTAAGGATAACAGCAACATCGAAGATTCAACAGAAAGTCCTTTGATCAAATGTGATTGCTCCTACAACAATAAATCTACTTGCCACATAACCCATCTGAAGGTTTCAGGATTGGATGTTGCTGGTGTAATCCCTCCCGAGCTATGGACACTGACTTCCCTCACCTATTTGAATTTGGAGAAAAATTTATTGTCAGGGACACTGTCGCCTTCTGTTGGTAATCTAACGCAATTGCATACCTTGCGCATTCAAATCAATAAATTATCAGGAAAACTTCCAAAGGAACTCGGACATCTTGCCAACCTAAGATTCTTGGCCTTTGGGATCAACAATTTCTCTGGTACCTTGCCATCAGAGCTTGGAAATCTTTTTGGGCTAGAGGAACTGTACTTAGATAGTTCTGGAGTTCAGGGTGACATTCCCACAACATTTTCAAATCTTACAAATTTGCGGACAGTATGGGCATCAGACAATAAACTCACCGGAGAAATACCTGGATTCATTGGGAGTTGGCTAAAACTCAGAACATTGAGGTTTCAAGGAAACTCTTTCATGGGACCAATACCGTCAACATTTTCAAAATTGACAGCTATGAATGATTTGAGAATAGGTGATCTATCAAATGGGGGATCTTCCCTAGAATTCATCAAGAATATGACGTCTCTGCGGACCCTAGTTTTGAGGAATAATGGTATATCAGATTTAATTCCTTCCTACATTGGAGAGTTTGAAGAATTGACGTGGCTAGACTTGAGTTTTAACAAGTTAAAGGGAGAAATTCCAGAGTGGATTTTCAACATGACTAAGCTGTCATACTTGTTTCTTGGAAACAACAAGTTAACGGGTAGACTACCTCAAACTAAGTCTGACTCTCTTCTTGTTATAGACTTATCATACAATGGTTTATCAGGGACCATTCCTGAATGGGTCGATGGTTCAACCTTACAGTTAAATTTAGTTGCCAACTACTTCCTGTCAGAACGTGTGAAAGAGAGCCATTTGCCTTTGGGTTTGCACTGTCTTCAACGTGAATTTTCTTGTAATGGAACTTCTGGAGGTTCTAGTTTGAAACCTAGTTTTGGGATCAACTGTGGTGGTTCAAAATTTGATGAGTATGATAAGCAAAGTGCGATTACTGGTGGAGCTTCATATTATGTTAGTGACTCAGAAACTTGGGCTGTTAGTGATGTTGGATACTTCCCTAATACCGAAAACTCTACTAGTTATAACGGAGGCAATAGAAACTCTACTAGTTATAACAGAGACAGAGACAGTGACACAACAGAATATATATTTGCAAATAGAAACGACTCAGAACTTTTTTGGACACAAGAATTATCTACTTCATCATTGAGATTTTACGGACTAGGGCTTAAAAACGGGATCTACACTGTGAACCTTCTGTTTGTAGAACAAGCTTTCACAAATTTGTTGAAATGGAGCAGCCTTGGGAGACGGGTCTTTGATATATATTTTCAGGGGGAACTTTTCCAGGAGGATTTTAGTATTCAAAATGAGGCAGGTGGGTCTTTTCGTCCTATTTCAAAGCCATTTAAGGTACCAGTTTCAAAAAACTACATGGAAATTCACCTTTTCTGGGCTGGGAAAGGTACTTGCTGCATACCTGAAGACGGTACTTTTGGTCCTTCTATTTCAGCAATCTTTGCAAGTCTAGATTCTGATCAGCCTGTAAGTAATGCGAAGAATGGAACTAGTCAAATAAAGGGGACTGGTAGTAAGAAGAATGCAGCCATTCTAATAGTGGGGATTGTTGTTGGTGTAGGATCTGTTTGCTTTCTAGTTTTCACAATTTCCATTCTTTTCCGTAGAAGGAAAGGTCGTTCCTCTGAAGATGAAGAACTCTTCGGAATTGATGATCAGAGACCTCACACTTATAGTTATTCTGAACTAAGGAATGCTACAGAGGATTTTGGTTCATCCAACAAGCTTGGAGAAGGGGGCTTTGGACCCGTTTACAAGGGAATACTGAATGATGGAAGAGTAATTGCTGTGAAGCAACTTTCTGTAAAATCTAATCAAGGAAGGAACCAATTTGTGGCTGAGATTTCTACATTATCCGCCGTGCAGCATCGCAACCTCGTGAAGTTGCACGGGTGTTGCATTGAGGGCCACAATCGTCTCCTTGTGTATGAGTACCTGGAGAAAGGGAGTCTGGACCAAGCATTATTTGGAAATAGAAGCTTCACTCTTGATTGGGCAAAACGATTTGATATATGCTTGGGTGTGGCGAGGGGTCTCTCTTATCTTCATGAAGAATCAAGGCTTCGAATTGTTCATAGAGATGTTAAAGCCAGTAACATTCTACTTGATGCTGATCTGAACCCCAAAATTTCAGATTTTGGTTTAGCCAAACTTTATGATGACGAAAAGACTCATATTAGCACCCTTGTTGCCGGAACAATTGGATATCTTGCACCTGAGTACGCCATGCGTGGCCATCTAACTGAGAAAGCTGATATCTTTAGTTTCGGTGTCGTGGCTCTTGAAATTGTCAGCGGTAGGCCGAATTCCGACAGAAGCTTGGAGGAGGACAAAGTTTTTCTTCTTGAACTGGCTTGGTACCTCTATGAAAACAACCGTGAAATCGAGTTGCTAGATTCGGATTTGTCGACATTCAATGAGGATGAAGTAAAACGAGTTATTCGAGTAGGTCTAATGTGCACTCAAACAACCCCAGCTCGACGGCCATTGATGTCACGGGTTGTGGCAATGTTGTGTGGAGACATTGAAGTGGCTGCTATAACTTCAAAGCCAGGATACTTAAGTGAATGGACCTTCAATGACTTGGTCACTTCTACAAATGATGCAACTACAGAAGGATCCAGCACTACCCATCAAGGTTCTTCAAGTTTTAGCATCCATGCTAACGATGCAACCTCTTCAAATTAA 3117 40.74 MASGVLVLVFACFLGSFPQNSSQSITDPHQEQTLNSIFRQWNIFAPNNTKKNGVRFQSWNISGNLCTGIAKDNSNIEDSTESPLIKCDCSYNNKSTCHITHLKVSGLDVAGVIPPELWTLTSLTYLNLEKNLLSGTLSPSVGNLTQLHTLRIQINKLSGKLPKELGHLANLRFLAFGINNFSGTLPSELGNLFGLEELYLDSSGVQGDIPTTFSNLTNLRTVWASDNKLTGEIPGFIGSWLKLRTLRFQGNSFMGPIPSTFSKLTAMNDLRIGDLSNGGSSLEFIKNMTSLRTLVLRNNGISDLIPSYIGEFEELTWLDLSFNKLKGEIPEWIFNMTKLSYLFLGNNKLTGRLPQTKSDSLLVIDLSYNGLSGTIPEWVDGSTLQLNLVANYFLSERVKESHLPLGLHCLQREFSCNGTSGGSSLKPSFGINCGGSKFDEYDKQSAITGGASYYVSDSETWAVSDVGYFPNTENSTSYNGGNRNSTSYNRDRDSDTTEYIFANRNDSELFWTQELSTSSLRFYGLGLKNGIYTVNLLFVEQAFTNLLKWSSLGRRVFDIYFQGELFQEDFSIQNEAGGSFRPISKPFKVPVSKNYMEIHLFWAGKGTCCIPEDGTFGPSISAIFASLDSDQPVSNAKNGTSQIKGTGSKKNAAILIVGIVVGVGSVCFLVFTISILFRRRKGRSSEDEELFGIDDQRPHTYSYSELRNATEDFGSSNKLGEGGFGPVYKGILNDGRVIAVKQLSVKSNQGRNQFVAEISTLSAVQHRNLVKLHGCCIEGHNRLLVYEYLEKGSLDQALFGNRSFTLDWAKRFDICLGVARGLSYLHEESRLRIVHRDVKASNILLDADLNPKISDFGLAKLYDDEKTHISTLVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALEIVSGRPNSDRSLEEDKVFLLELAWYLYENNREIELLDSDLSTFNEDEVKRVIRVGLMCTQTTPARRPLMSRVVAMLCGDIEVAAITSKPGYLSEWTFNDLVTSTNDATTEGSSTTHQGSSSFSIHANDATSSN* 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4643757 4707904 - Chy10G173820.1 Chy10g00188 234563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00188 1038 Pfam Malectin domain 431 623 IPR021720 -
Chy10g00188 1038 Gene3D Transferase(Phosphotransferase) domain 1 789 991 - -
Chy10g00188 1038 Gene3D Ribonuclease Inhibitor 15 273 IPR032675 -
Chy10g00188 1038 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 134 1027 - -
Chy10g00188 1038 Gene3D - 428 626 - -
Chy10g00188 1038 MobiDBLite consensus disorder prediction 1011 1038 - -
Chy10g00188 1038 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 134 1027 - -
Chy10g00188 1038 CDD STKc_IRAK 719 983 - -
Chy10g00188 1038 ProSiteProfiles Protein kinase domain profile. 713 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00188 1038 Pfam Protein tyrosine and serine/threonine kinase 716 980 IPR001245 GO:0004672|GO:0006468
Chy10g00188 1038 Gene3D Phosphorylase Kinase; domain 1 676 788 - -
Chy10g00188 1038 SUPERFAMILY Protein kinase-like (PK-like) 696 981 IPR011009 -
Chy10g00188 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Chy10g00188 1038 SUPERFAMILY L domain-like 94 378 - -
Chy10g00188 1038 SMART serkin_6 713 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00188 1038 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Chy10g00188 1038 Gene3D Ribonuclease Inhibitor 274 397 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00873 Chy-Chr1:7804856 Chy10g00188 Chy-Chr10:4643757 0 dispersed
Chy07g00996 Chy-Chr7:14682016 Chy10g00188 Chy-Chr10:4643757 3.70E-110 dispersed
Chy10g00188 Chy-Chr10:4643757 Chy12g00049 Chy-Chr12:443043 1.16E-12 dispersed
Chy12g00947 Chy-Chr12:14797602 Chy10g00188 Chy-Chr10:4643757 8.20E-99 dispersed
Chy10g00188 Chy-Chr10:4643757 Chy07g00003 Chy-Chr7:47337 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71493 PF07714 PK_Tyr_Ser-Thr 7.30E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00188 - - csv:101214104 1977.99