Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00198 ATGAAGCTCATCCCCTTCCTCCCATGGCCGAAACTCCATATGGCCATCCTCCTCCTCTTCTTCCTTTCTTCTCCTTCACTGCTATATTCATCCCCTGTTTCTTCACTTCCCCACAATGAAGGACGAGCGCTTATGTCAATCAAAGCCTCGTTTAGCAATGTAGCTAATGTGTTGCTTGACTGGGATGATGATCATAACCATGATTTCTGTTCATGGCGTGGGGTTTTCTGTGACAATGTTAGCCTTTCAGTTGCTGCTTTGAACTTGTCCAACTTGAATCTGGGTGGGGAGATTTCACCATCCATTGGAGATTTGAGGAACTTACAGTCAATTGATTTTCAAGGGAATAAACTGACGGGCCAAATCCCTGATGAGATTGGTAACTGTGGTCTTCTTGTCCATTTGGATTTGTCTGATAATTTGCTCTATGGAGACATCCCCTTCACGGTTTCAAAGCTGAAGCAGCTCGAGTTTCTGAATATGAAGAACAATCAATTGACCGGTCCGATCCCTTCGACCTTAACACAGATTCCCAGTCTGAAAACTCTCGATCTTGCTAGAAACCAGCTTACTGGGGAGATACCTAGATTAATCTATTGGAATGAAGTACTGCAATATCTTGGATTACGAGGGAACTTTTTGACAGGGTCGTTGTCCTCGGATATGTGTCAATTGACTGGCTTGTGGTATTTCGATGTAAGGGGCAACAATTTGACTGGCTCGATACCTGATAGCATAGGCAACTGTACCAGTTTTGAAATACTGGATATATCTTACAATCAGATCTCAGGAGAGATTCCATACAACATTGGATTTCTACAAGTGGCCACTTTATCGTTACAGGGAAATAGGTTGACTGGTAAGATTCCCGATGTCATTGGATTGATGCAGGCCCTTGCCGTTCTGGATTTGAGTGAGAATGAGCTTGAAGGTCCAATACCACCAATACTTGGGAACTTGTCCTACACGGGAAAATTGTATCTACATGGAAACAAGTTGACTGGGCCAATTCCTCCCGAGCTGGGCAATATGTCGAAGCTTAGCTACTTACAACTAAATGATAACCAGTTGGTTGGTACAATTCCTTCTGAACTTGGGAAGCTGGATCAGTTGTTTGAACTAAATCTTGCTAATAATTATCTTGAAGGACCTATCCCTCACAACATCAGTTCTTGCACTGCATTGAATCAATTCAATGTTCATGGAAACAATCTTAACGGATCAATCCCTTTGGGTTTCCAAAATCTGGAGAGCTTGACTTATTTGAACCTTTCAGCTAACAACTTCAAAGGCAGGATACCTGTTGAGCTGGGACGCATAGTAAACCTTGATACATTGGATCTATCTTGCAATTACTTCTTGGGTCCTGTTCCTGCTTCTATCGGTGATTTGGAGCACCTTCTTAGCCTCAACTTGAGCAATAACCGACTTGTTGGGCCATTGCCAGCAGAATTTGGGAATCTTCGAAGTGTTCAGATGATTGATATGTCATTCAACAACCTTTCGGGTAGCATACCCATGGAGTTGGGTCTACTGCAGAATATTATCTCCCTCATTTTAAACAATAACCATTTTCAAGGGAAAATACCTGATCGGCTGACTAATTGCTTTAGTCTTGCCAATTTGAACTTGTCATACAACAACTTATCTGGTATCTTACCTCCCATGAAAAATTTCTCTCGCTTCGAACCAAATAGCTTTATTGGTAATCCACTGCTGTGTGGAAACTGGCTGGGTTCGATCTGTGGGCCTTACATGGAGAAATCTCGAGCAATGTTGTCTCGGACAGTGGTTGTTTGTATGTCATTTGGATTCATAATACTGTTGTCAATGGTTATGATTGCTGTGTACAAATCGAAGCAATTGGTGAAGGGTTCTGGCAAGACTGGGCAAGGTCCTCCAAATCTTGTGGTACTTCATATGGATATGGCTATTCACACCTTCGAGGACATTATGAGAAGTACTGAGAATCTAAGCGAGAAATACATTATTGGTTACGGAGCTTCGAGCACTGTGTACAAATGTTTATTGAAAAATTCCCGACCTATTGCAATTAAGCGACTTTACAATCACTATGCACACAATTTACGGGAGTTTGAGACTGAACTCGGAACTATTGGTAGTATCCGACATAGAAATCTTGTTAGCCTTCATGGTTATTCACTATCTCCCTGTGGGAATCTCCTCTTCTATGACTACATGGAAAATGGTTCACTCTGGGATCTTCTCCACGCTGTTGATCCCGAGGTTTCAGTCACCTGCATTGATTTAGCCCATGTTAGAAAAACGTTCCAGCTCGCTCTCCTCTGCACAAAACACAATCCCTCCGAAAGGCCAACCATGCATGAAGTTTCACGAGTCTTGATCTCCCTCCAGCCACCACGACCTACTGTGAAACAAACTTCATTCCCCACGAAAACGTTGGATTACGCACAATACGTGATTGAAAAGGGTCAGAATCGAAACTTGAAAGGAGGGCAGGAGGAGCAGCAGAAGTCAGACGTGAATACTTCGGATGCTCGGTGGTTTGTTCAGTTTGGGGAAGTTATGTCTGAACAGCACAGTTTGAATCAATAA 2577 42.76 MKLIPFLPWPKLHMAILLLFFLSSPSLLYSSPVSSLPHNEGRALMSIKASFSNVANVLLDWDDDHNHDFCSWRGVFCDNVSLSVAALNLSNLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGLLVHLDLSDNLLYGDIPFTVSKLKQLEFLNMKNNQLTGPIPSTLTQIPSLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNFLTGSLSSDMCQLTGLWYFDVRGNNLTGSIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPDVIGLMQALAVLDLSENELEGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNDNQLVGTIPSELGKLDQLFELNLANNYLEGPIPHNISSCTALNQFNVHGNNLNGSIPLGFQNLESLTYLNLSANNFKGRIPVELGRIVNLDTLDLSCNYFLGPVPASIGDLEHLLSLNLSNNRLVGPLPAEFGNLRSVQMIDMSFNNLSGSIPMELGLLQNIISLILNNNHFQGKIPDRLTNCFSLANLNLSYNNLSGILPPMKNFSRFEPNSFIGNPLLCGNWLGSICGPYMEKSRAMLSRTVVVCMSFGFIILLSMVMIAVYKSKQLVKGSGKTGQGPPNLVVLHMDMAIHTFEDIMRSTENLSEKYIIGYGASSTVYKCLLKNSRPIAIKRLYNHYAHNLREFETELGTIGSIRHRNLVSLHGYSLSPCGNLLFYDYMENGSLWDLLHAVDPEVSVTCIDLAHVRKTFQLALLCTKHNPSERPTMHEVSRVLISLQPPRPTVKQTSFPTKTLDYAQYVIEKGQNRNLKGGQEEQQKSDVNTSDARWFVQFGEVMSEQHSLNQ* 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4964620 4970340 + Chy10G173920.1 Chy10g00198 234573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00198 858 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 745 829 - -
Chy10g00198 858 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 31 745 - -
Chy10g00198 858 SUPERFAMILY L domain-like 319 575 - -
Chy10g00198 858 SUPERFAMILY L domain-like 38 331 - -
Chy10g00198 858 Gene3D Ribonuclease Inhibitor 37 202 IPR032675 -
Chy10g00198 858 SMART LRR_typ_2 177 201 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 105 129 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 296 320 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 464 487 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 344 368 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 225 249 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 153 176 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 416 440 IPR003591 -
Chy10g00198 858 SMART LRR_typ_2 512 536 IPR003591 -
Chy10g00198 858 Pfam Leucine Rich repeat 248 265 IPR001611 GO:0005515
Chy10g00198 858 Pfam Leucine Rich repeat 178 193 IPR001611 GO:0005515
Chy10g00198 858 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Chy10g00198 858 Gene3D Phosphorylase Kinase; domain 1 629 733 - -
Chy10g00198 858 ProSiteProfiles Protein kinase domain profile. 658 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00198 858 Pfam Protein kinase domain 661 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00198 858 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 31 745 - -
Chy10g00198 858 Gene3D Ribonuclease Inhibitor 203 275 IPR032675 -
Chy10g00198 858 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515
Chy10g00198 858 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Chy10g00198 858 Gene3D Ribonuclease Inhibitor 276 360 IPR032675 -
Chy10g00198 858 Gene3D Ribonuclease Inhibitor 361 457 IPR032675 -
Chy10g00198 858 Gene3D Ribonuclease Inhibitor 458 583 IPR032675 -
Chy10g00198 858 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Chy10g00198 858 SUPERFAMILY Protein kinase-like (PK-like) 634 748 IPR011009 -
Chy10g00198 858 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 745 829 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00198 Chy-Chr10:4964620 Chy12g01139 Chy-Chr12:16342205 4.48E-83 dispersed
Chy02g00164 Chy-Chr2:1167560 Chy10g00198 Chy-Chr10:4964620 3.97E-30 transposed
Chy02g00679 Chy-Chr2:4133282 Chy10g00198 Chy-Chr10:4964620 1.68E-52 transposed
Chy02g02120 Chy-Chr2:25504076 Chy10g00198 Chy-Chr10:4964620 1.77E-50 transposed
Chy02g02630 Chy-Chr2:29404259 Chy10g00198 Chy-Chr10:4964620 1.84E-08 transposed
Chy05g00115 Chy-Chr5:875267 Chy10g00198 Chy-Chr10:4964620 3.02E-23 transposed
Chy07g00282 Chy-Chr7:2289357 Chy10g00198 Chy-Chr10:4964620 1.70E-19 transposed
Chy07g01241 Chy-Chr7:17164773 Chy10g00198 Chy-Chr10:4964620 7.39E-22 transposed
Chy08g00162 Chy-Chr8:3619213 Chy10g00198 Chy-Chr10:4964620 3.84E-31 transposed
Chy10g00198 Chy-Chr10:4964620 Chy09g00989 Chy-Chr9:12548503 8.62E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71495 PF00069 Pkinase 1.30E-08 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00198 K20718 - csv:101213139 1415.59