Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00271 ATGGGCTGCATTTGCTCTAAGGGAATTCCAGCAAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGACTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAATCAACCCGGGGAAGAGAATGCTGGATCAACACCCGAATCAGATGGGGCTGAGAAGGCAACATCCATCGGAAAAGTTAGCAGTGCCAAGCCCCTGCGTCAAGAACGGCCAACTATGGAGGATGGAGAAAAGAGAGTAGGAGTACACAATAACAATGCAACACCTAGAATATTCGGTGTTGTAATTGGGGAAAAAGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGACATTGAAACAAACAAGATTGTTGCATTAAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATTACTTCAAGGGTGTCGGGCAGTTTATACCTCATATTTGAGTACATGGAACACGATCTTGCAGGGTTGGTAGCTACCTCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAGCAACTGCTTTGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGTTCAAACCTTCTGATTGACAATAATGGTAATTTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCATCCTCGACCAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTTCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTTCTGGCTGCATTCTTGCAGAACTATATGCTGGAAAGCCTATCATGCCTGGAAGGACAGAGGTGGAGCAATTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCACATGCCACCATTTTTAAACCTCAACATCCTTACAAGCGGTGTATTGCTGAGACATTCAAAGACTTCCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTTGCGGTAGAACCTGATGGCCGTGGAACAGCATCCTCTGCCCTTCGAAGTGAGTTCTTTACCACCAAACCGCTTCCCTCAGATCCCTCTGATTTGCCAAAGTACCCACCATGCAAGGAGTTTGATGTGAAGCTTCGAGACGAGGAAGCTCGTAGAAGAAGAGCTCCTATCAGTGTTGCACGTGAGCATGAAGCAGCTCGTAAGTTTCCCCGAGAGTCAAAAGCAATTCCTGCACCACATGCAAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGCGCAGCAGAATTCTACAAGTGTCAGTGAAAAGTATAGTCACGAAGAGGACAGTGGCTCTGGCTTTTGCATCGAGCCAAGAAAAGAAGCAACACAAATGCAGCCAACTGGATTAGGTTCTTCACAAAACCTGAATGGGAATCAGGGTGATAATCAAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGCGGTCTTTTATGCAGCATGGTGCTGGACAGTTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGACTGTGGTGGAGAAAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGGGAATCTTCAGAAAAGCATGAATGGTCTCGCCATTTACTAGGCAGGCCAAAATCTTTATATAAGATGGATGATCAGTCATCTGGACAAGAGTCTACAACGTGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCTGGTGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAAATGGAAGCATTGCTTCACCATGTGAAAAACGGCAATTGA 2199 44.93 MGCICSKGIPANDYVAENHSKERHLKSNRSSRHGTSLRKEESVLHSDGGQSDAMARLILNQPGEENAGSTPESDGAEKATSIGKVSSAKPLRQERPTMEDGEKRVGVHNNNATPRIFGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATSGIKFTEAQIKCYMKQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFHPRPKQPLTSRVVTLWYRPPELLLGSTDYGVSVDLWSSGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCIAETFKDFPFSALALLDVLLAVEPDGRGTASSALRSEFFTTKPLPSDPSDLPKYPPCKEFDVKLRDEEARRRRAPISVAREHEAARKFPRESKAIPAPHANAELQASIQKKQAQQNSTSVSEKYSHEEDSGSGFCIEPRKEATQMQPTGLGSSQNLNGNQGDNQRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFDCGGESSANSHWPEECFNVSYNHFNGGESSEKHEWSRHLLGRPKSLYKMDDQSSGQESTTCYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMEALLHHVKNGN* 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6694529 6711998 + Chy10G174650.1 Chy10g00271 234646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00271 732 PANTHER BNACNNG19830D PROTEIN 86 713 - -
Chy10g00271 732 CDD STKc_CDK9_like 155 439 - -
Chy10g00271 732 SMART serkin_6 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00271 732 SUPERFAMILY Protein kinase-like (PK-like) 149 446 IPR011009 -
Chy10g00271 732 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Chy10g00271 732 PANTHER CELL DIVISION PROTEIN KINASE 86 713 - -
Chy10g00271 732 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00271 732 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00271 732 MobiDBLite consensus disorder prediction 505 521 - -
Chy10g00271 732 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524
Chy10g00271 732 MobiDBLite consensus disorder prediction 17 107 - -
Chy10g00271 732 MobiDBLite consensus disorder prediction 545 567 - -
Chy10g00271 732 Gene3D Transferase(Phosphotransferase) domain 1 238 479 - -
Chy10g00271 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Chy10g00271 732 MobiDBLite consensus disorder prediction 465 493 - -
Chy10g00271 732 Coils Coil 683 703 - -
Chy10g00271 732 MobiDBLite consensus disorder prediction 465 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00032 Chy-Chr9:301478 Chy10g00271 Chy-Chr10:6694529 0 dispersed
Chy09g00218 Chy-Chr9:1828875 Chy10g00271 Chy-Chr10:6694529 4.32E-173 dispersed
Chy10g00271 Chy-Chr10:6694529 Chy11g01134 Chy-Chr11:17034333 0 dispersed
Chy10g00271 Chy-Chr10:6694529 Chy12g01147 Chy-Chr12:16403329 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71497 PF00069 Pkinase 1.40E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00271 - - csv:101214435 1450.65