Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00311 ATGTCCTCCGAAGACATCATTGGCCTCAACTCCCACCTCGTCTTCCAGGACGAATCCCTCCCTTTCAATTGCTCCTCCACTCCCCATCGTCGCCTCCCTGACCCACCTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGCCGTCGACCGTGACCGATTCTTTTCCCAACAGGGGCTTGTTTCTTTGGATGATGTTAATAAGTGTAGTAAAACTGCCAGCCCCATTCGCAGTAACAATGATAGAAGTGATCAGAGTTGTGGGGGGTTGAAGAATGGGACAGACAAATTGGGAAATGGGAAGCGTAAGCAGCATTCTTCTTTTGTCAAAGATGCTTTGGCTGGGTCTTCCGGAGCAACTCAGAATGAAAACAATCCGCAGGGAAGGTTAGGGAATTATCCAAATGCGGTTACAGTTGCAGAGCCTGATAGTGAAGCTTATTATTCTCAGTATTTGCAAAGCAATGAAGGCTCTGCTTCTGAGCAGAAGGATTTGAGTATCGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTTCAGGAGAGCCTGGAGAGTCTTTGAGAGCAATTCTCGCTGACCCTGTGACGGGTGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGATTAAAATCTTGTTACTCGTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCCCAAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGCGAAGAAGAATTATTATTTTACCTCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACGCTCATGGATACTCAAAGAGGTCGAGGTGTTCAGTTTCCCTTTGCGGTGACAGATAGGGTAATTATTAAGGGGAACAAGAGGACGCCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACGCTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCACTTGCAAAGGTTCAAAATGATGCAACATCAAAGATGATAACGAGGAAGATGATGCCAAATTGGCTTTAG 1125 46.76 MSSEDIIGLNSHLVFQDESLPFNCSSTPHRRLPDPPPKTRELCGFMDDKLFPAVDRDRFFSQQGLVSLDDVNKCSKTASPIRSNNDRSDQSCGGLKNGTDKLGNGKRKQHSSFVKDALAGSSGATQNENNPQGRLGNYPNAVTVAEPDSEAYYSQYLQSNEGSASEQKDLSIENGCGFGRRDVSFSGEPGESLRAILADPVTGALMDDAMILPCGHSFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLFYLSPKRRRERFEQDKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL* 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7777039 7780818 + Chy10G175050.1 Chy10g00311 234686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00311 374 MobiDBLite consensus disorder prediction 75 112 - -
Chy10g00311 374 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 69 374 - -
Chy10g00311 374 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 69 374 - -
Chy10g00311 374 MobiDBLite consensus disorder prediction 75 97 - -
Chy10g00311 374 SUPERFAMILY RING/U-box 196 261 - -
Chy10g00311 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 263 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00564 Chy-Chr4:5935497 Chy10g00311 Chy-Chr10:7777039 0 dispersed
Chy10g00104 Chy-Chr10:2549467 Chy10g00311 Chy-Chr10:7777039 4.53E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00311 - - csv:101218241 708.753