Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00314 ATGGAACTCCCCAATCCCACTAATCAAATGGCTTCCTCTTCCAACCCCACTCCCCCATTTCGCGGTTCCTACCACCGTCGAGCTCATTCCGAGGTCCATTTCCGGATTCCTGACGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGAAGATCTGGGCTTTGAGGATGATCTCTTGTGTACTTTCATGGACATCGAGAAGATCGGATCTAAAATCGACAATGGGTCTTCGTCAAATCCTGCAATGGCTTCCGGTGGTACTGGGGGGGTGTATGTTGAAGGGGAGAAAATCTCACGCCCCAGGCACCGTCATAGCAATTCTGCTGATGGGTCTTCCATTTTGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACTATTGATCCTAAACGTGCCAAGAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGGAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCAACAACTCTCTCTGCACAGCTCACATTGTATCAGAGAGATACCACTGGGCTTTCAACTGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATTTACGCGATGCTCTAAATGAAGCTTTGAAAAAAGAAGTTGAGCGGCTCAAGATTGCGACTGGAGAAGTAATGACAGCAACGGATTCGTATAACTTTGGAATGCCTCAAGTTTCATATCCCCAATTTTCCTTTTCACACCAACCACAACCTGGGCGACACAACCCACAGAGGATGACGACGCAAAGACCCCAAGTTCAACCATTCCATTCTAATTTACCAAACCCACATCAGGCTTTGTTTGTTGCATCGCACCAGCCTCATTCCTTAACAGAAATGTTTCAGCAGGATCCTATTACCCGATTGCAGGGTCTTGATATTGGTAGCAGAGGCACAGAAATAAAGCCCGAAGGCTCCTCAATATCGGTTGATGGGACAAGCAAAATTACTAAATTGTCCACATTTGAAGGGTCATTTTAG 1062 46.42 MELPNPTNQMASSSNPTPPFRGSYHRRAHSEVHFRIPDDLDLVSDPFDAPSSGFEDLGFEDDLLCTFMDIEKIGSKIDNGSSSNPAMASGGTGGVYVEGEKISRPRHRHSNSADGSSILESIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIMELERKVQSLQTEATTLSAQLTLYQRDTTGLSTENSELKLRLQAMEQQAHLRDALNEALKKEVERLKIATGEVMTATDSYNFGMPQVSYPQFSFSHQPQPGRHNPQRMTTQRPQVQPFHSNLPNPHQALFVASHQPHSLTEMFQQDPITRLQGLDIGSRGTEIKPEGSSISVDGTSKITKLSTFEGSF* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7869775 7875517 + Chy10G175080.1 Chy10g00314 234689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00314 353 MobiDBLite consensus disorder prediction 1 24 - -
Chy10g00314 353 CDD bZIP_plant_RF2 143 192 IPR044759 GO:0003700|GO:0006355
Chy10g00314 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 203 IPR004827 GO:0003700|GO:0006355
Chy10g00314 353 SUPERFAMILY Leucine zipper domain 142 193 IPR046347 GO:0003700|GO:0006355
Chy10g00314 353 MobiDBLite consensus disorder prediction 1 20 - -
Chy10g00314 353 Pfam bZIP transcription factor 142 196 IPR004827 GO:0003700|GO:0006355
Chy10g00314 353 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 338 - -
Chy10g00314 353 Gene3D - 141 194 - -
Chy10g00314 353 PANTHER BZIP TRANSCRIPTION FACTOR 18 7 338 - -
Chy10g00314 353 Coils Coil 158 185 - -
Chy10g00314 353 Coils Coil 217 237 - -
Chy10g00314 353 SMART brlzneu 138 202 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00519 Chy-Chr3:7178412 Chy10g00314 Chy-Chr10:7869775 1.11E-63 dispersed
Chy06g00824 Chy-Chr6:5814339 Chy10g00314 Chy-Chr10:7869775 3.51E-59 dispersed
Chy06g00833 Chy-Chr6:5912175 Chy10g00314 Chy-Chr10:7869775 1.45E-67 dispersed
Chy10g00314 Chy-Chr10:7869775 Chy11g01164 Chy-Chr11:17745019 1.44E-109 dispersed
Chy10g00314 Chy-Chr10:7869775 Chy11g00653 Chy-Chr11:7905677 3.61E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18549 PF00170 bZIP_1 1.90E-08 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00314 - - csv:101209388 659.062