Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00329 ATGGATCTTGAGCATGGGAAGTGTTGGGATAGTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTTGTCTATGGCGATTTGAGCATCTCTCCTCTTTACGTTTATAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACTAACGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTTCCTCTTTTCAAATACGTTTTTGTAGTTCTTAGAGCTGATGACAATGGTGAAGGTGGAACTTTTGCTCTGTACTCTTTAATTTGTAGACATGCCAAAGTAAGCCTTCTCCCCAATAGACAAGTTGCTGATGAAGCTCTTTCAACTTACTTGCTGGAACATTCACCAGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTACTAGAGAAGCACAGGGCTCTTCACACTGCCTTGTTGATTCTTGTTCTTCTGGGGACTTGTATGGTGATTGGAGATGGTCTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGACCAAGGCTCACCATCAGTACGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTCGGCTTTGTATTTGCCCCCATTGTATTGGCATGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACACTGGAATCCACATGTTTATGAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGTGGTTGGATGTCGTTGGGGGGTATATTGCTATGCATAACAGGCTCAGAAGCGATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTTTTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAGCATTGGCTTCTACGTTTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTACAATTGCTATACTTGCATCGGTTGTTGGAAGCCAAGCAATCATCAGTGGAACATTCTCCATTATTAACCAGAGCCAATCTCTTGGGTGCTTCCCTCGAGTGAAGGTTGTTCATACATCTGATAAGATCCATGGCCAGATCTACATTCCAGAGATCAATTGGATCCTTATGATTCTCTGCGTAGCTGTTACGATTGGATTTAGAGACATAAAACATCTTGGAAATGCATCAGGTCTGGCTGTAATGACTGTGATGCTTGTAACAACATGTCTTACATCTTTGGTGATTGTTCTTTGTTGGAACAAATCTCCACTTTTGGCTCTCGCCTTTTTGATCTTCTTTGGGTCTGTTGAATTGCTTTATTTCTCAGCTTCATTGACCAAGTTCAGAGAAGGCGCATGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTCCACAACAAGGTTTCATTAGAATGGTTGCTAGCATTGGGGCCAAGCCTTGGGATTGCTCGTGTCCCTGGCATAGGATTAGTCTTCACCGATCTCACCTCTGGCATCCCTGCCAACTTCTCCCGCTTTGTTACCAACCTCCCTGCATTTCATCGGATTCTCGTCTTTGTATGTATCAAGTCAGTACCAGTTCCTTTTGTACCTCCTGCTGAGCGATATCTTGTGGGAAGAGTTGGCCCAGCTACGCATCGATCGTACAGGTGCATTGTTCGGTATGGCTACCGTGATGTTCACCAGGATGTAGACTCATTTGAATCTGAATTAATCAAGAAACTTGCGGACTTCATCCGCTATGATTGGTTCAGAAAGCAAAGAGGCAACTCTTGCAGTGAGGATGATGCATCCCGTTCAAATGAATCGACAAGTGAATGCAGGCTGGCTGTGATTGGAACCATAGCATTCGCAGGTGCAACTGCTTACGAGGAGACTGTGCAGCCTGCAAGCGTATCAGTCGGGTTCCAAACTGTCGACAGCATCGCTGATGTGATTGAAATGGAGCCACTGGGAGAAGAAAGAAGAGTCAGATTTGCCATAGATGACGAATTTGAGGGTGGCTCACAAGCTGAAACAGAAGTCCTTCTGCAAGAAGAGCTAGAAGATCTTATAGCAGCACAGCAATCCGGGACAGCATTCATTCTCGGGCATTCACACGTCCGTGCGAAGCAAGGATCGTCTCTGTTGAAGAGGCTGGCCATTAACTATGGCTACAACTTCCTGAGAAGGAATTGTAGGGGAGCAGATGTTGCTCTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2373 43.99 MDLEHGKCWDSSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHSPEKKKQSKVKLLLEKHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLAWLLCISTLGIYNIIHWNPHVYEALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKSIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALAFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELIKKLADFIRYDWFRKQRGNSCSEDDASRSNESTSECRLAVIGTIAFAGATAYEETVQPASVSVGFQTVDSIADVIEMEPLGEERRVRFAIDDEFEGGSQAETEVLLQEELEDLIAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV* 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8170016 8175401 + Chy10G175230.1 Chy10g00329 234704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00329 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy10g00329 790 PANTHER POTASSIUM TRANSPORTER 2 1 790 - -
Chy10g00329 790 Pfam K+ potassium transporter 25 600 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy10g00329 790 TIGRFAM kup: potassium uptake protein 23 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00327 Chy-Chr9:2823954 Chy10g00329 Chy-Chr10:8170016 0 dispersed
Chy10g00329 Chy-Chr10:8170016 Chy10g00917 Chy-Chr10:14824992 0 dispersed
Chy10g00329 Chy-Chr10:8170016 Chy04g01475 Chy-Chr4:21404996 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00329 K03549 - csv:101211022 1537.32