Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00351 ATGGGTAAAACTAAAACTCCATTTGATTTCAACTCTTTTTCGAGATACCCATTTGGGGATTTTGGGGTTTTCTTTACCCTGTGTCTTGATGTGCTCTGTTTTTCACCTAAGAAGAAGGAGAAATGGAAGATTCTGAGGCAAAACCCTAACGTGTTTGTTTTGTTGCTTTTGTTCCTTAATTTGGTTCCTGTTTTGAGTCAGGATTGGGATGGTGTGGTTGTGACTCAATCTGATTTTCAATCCCTTCAGGCATTTAAGCAAGAGCTTGATGATCCCAAAGGGTTTTTGAAGAGTTGGAATGATAGTGGATTTGGGGCTTGTTCTGGTGGTTGGGCTGGGATTAAATGTGCCAAGGGACAAGTTATTGTAATACAGCTTCCATGGAAGGGATTACGAGGTAGAATCACTGAGAAGATTGGCCAACTGCAAGCACTTAGGAAGCTTAGTTTACACGATAACTCTATTGGTGGATCAATCCCTTCTTCATTGGGGCTTCTTCCAAATCTTAGAGGGGTTCAGTTATTCAATAATCGACTTTCGGGTTCGATTCCGGCTTCATTGGGACTTTGTCCCGTGCTTCAAACACTTCACATTGGTAACAATTTGCTCACTGGAACAATACCACCTACTTTGGCTAACTCCACCAAGCTCTATTGGCTTAACTTGAGCTTGAACTCACTTTCGGGTCCGATTCCAACTACTCTTACTCGTTCGGTGTCCCTTACTTTCCTTGACCTTCAACATAACAATCTCTCAGGCAGCATTCCAGACTCTTGGGGTGGTGACGAGCAAAACCGTGTGTTTCAGCTCAAGTCTCTGACTCTTGATGGCAATCTCCTCTCAGGTACCATACCAACTTCTTTAAGTAAGTTAAGTGAGCTTCAAGTGATTTCCCTTAGCCACAATAGGTTCAATGGTGGCATTCCTGAAGAAATTAGTAGGCTTTCTTTGCTCAAAACATTGGATGTTTCTAATAATTTCCTTAATGGAAGTATGCCCCAAAGTTTTGATAGATTGAGAAACCTCTCTATACTCAACTTGAGTAGAAACAGATTGAATGGTCAAATTCCTGAAACTTTAGGGAACGTTTCAACACTTAAACAACTTGATTTATCTCAGAACAATCTAAGTGGAGAAATTCCAGCTTCCCTTGCTGATTTGCAAGGTCTTCAATCCTTAAATGTCTCATACAACAACCTTTCGGGTTCGGTTCCTCGAGCTCTCGCTGAAAAATTCAATGCAAGTTCCTTTGTTGGGAACATTCAGCTCTGTGGGTTCAGTGGTTCAATTCTGTGCCCGTCCCCAGCCCCTTCTCAAGAAGCTCCTGCTCCTCCACCAGAAAGTTCGACAACCCGACATCGGAAGTTAAGTACTAAAGATATAATCCTCATAGCAGCAGGAGCCCTTCTTCTGGTATTGGTTATAGTTTTCTTTATATTGCTCTGCTGCTTGATAAGGAAAAGGGCTGCTTCAAAAGGGAAGGATGGTGGTGAAGCTGGAGCAGCTGGGGCTGCGAGGGCCGAGAAGGGCGTCCCCCCGACTAGCAGTGAAGTTGAAGCGGCTGGAGGTGGGGATGCTGGTGGGAAGCTCGTCCATTTCGACGGGCAAACGGTCTTCACAGCAGATGATCTTTTGTGTGCAACAGCAGAAATAATGGGAAAGACTCGTGGACCGGACACGTCCATTGATTGGCCAACAAGGATGAAGATAGCTCAGGGTATGACCCGTGGCCTGTGTCACCTTCACACGCACGAGAACAGCATCCATGGAAACCTGACATCAAGCAACATTCTACTTGATGAGTACATAAACGCTAAGATTGCAGATTTTGGCTTGTCAAGGTTGATGACAGCAGCTGCAAGCTCAAATGTGATAGCAACAGCCGGGGCACTTGGGTACCGAGCACCAGAACTCTCAAAGTTGAAGAAAGCAAACACAAAAACCGATATTTACAGCCTTGGAGTCATCATATTGGAACTCTTGACTGGTAAGTCCCCCGGTGAAGCCATGAACGGAGTTGATTTACCTCAATGGGTCGCATCGATCGTCAAAGAGGAGTGGACTAATGAAGTTTTTGATTTGGAACTGATGAGAGAGGCATCTACCATTGGAGATGAGTTACTAAACACTCTGAAACTCGCTTTGCATTGTGTCGACCCTTCACCGTCAGCGAGACCGGAAGTTCAACAAGTTTTGCAACAACTGGAAGAGATAAGGCCAGAAACTGCTCCAAGTTCTGGGGATGATGGAATAGGAGGAAGAGGAGGGGGAGGAGCCCCTTCAACAAATCGTGTAAAATATGCAAGTAGATTTTATTGGAATACAATAGGTTTCAAAGCGCTCGATGAAAGAGTTTACAAGACCATCACGAACAATGTACACCAATCCGCTCGCTAA 2397 44.47 MGKTKTPFDFNSFSRYPFGDFGVFFTLCLDVLCFSPKKKEKWKILRQNPNVFVLLLLFLNLVPVLSQDWDGVVVTQSDFQSLQAFKQELDDPKGFLKSWNDSGFGACSGGWAGIKCAKGQVIVIQLPWKGLRGRITEKIGQLQALRKLSLHDNSIGGSIPSSLGLLPNLRGVQLFNNRLSGSIPASLGLCPVLQTLHIGNNLLTGTIPPTLANSTKLYWLNLSLNSLSGPIPTTLTRSVSLTFLDLQHNNLSGSIPDSWGGDEQNRVFQLKSLTLDGNLLSGTIPTSLSKLSELQVISLSHNRFNGGIPEEISRLSLLKTLDVSNNFLNGSMPQSFDRLRNLSILNLSRNRLNGQIPETLGNVSTLKQLDLSQNNLSGEIPASLADLQGLQSLNVSYNNLSGSVPRALAEKFNASSFVGNIQLCGFSGSILCPSPAPSQEAPAPPPESSTTRHRKLSTKDIILIAAGALLLVLVIVFFILLCCLIRKRAASKGKDGGEAGAAGAARAEKGVPPTSSEVEAAGGGDAGGKLVHFDGQTVFTADDLLCATAEIMGKTRGPDTSIDWPTRMKIAQGMTRGLCHLHTHENSIHGNLTSSNILLDEYINAKIADFGLSRLMTAAASSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVIILELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDLELMREASTIGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPETAPSSGDDGIGGRGGGGAPSTNRVKYASRFYWNTIGFKALDERVYKTITNNVHQSAR* 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8781934 8784953 + Chy10G175450.1 Chy10g00351 234726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00351 798 SUPERFAMILY L domain-like 115 408 - -
Chy10g00351 798 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Chy10g00351 798 Pfam Leucine rich repeat 340 400 IPR001611 GO:0005515
Chy10g00351 798 Pfam Leucine rich repeat 269 326 IPR001611 GO:0005515
Chy10g00351 798 Gene3D Transferase(Phosphotransferase) domain 1 550 748 - -
Chy10g00351 798 Pfam Protein kinase domain 567 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00351 798 ProSiteProfiles Protein kinase domain profile. 458 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00351 798 PRINTS Leucine-rich repeat signature 241 254 - -
Chy10g00351 798 PRINTS Leucine-rich repeat signature 339 352 - -
Chy10g00351 798 MobiDBLite consensus disorder prediction 738 761 - -
Chy10g00351 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 19 357 - -
Chy10g00351 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 337 555 - -
Chy10g00351 798 Pfam Leucine rich repeat N-terminal domain 76 116 IPR013210 -
Chy10g00351 798 Gene3D Ribonuclease Inhibitor 192 265 IPR032675 -
Chy10g00351 798 Gene3D Ribonuclease Inhibitor 77 191 IPR032675 -
Chy10g00351 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 555 743 - -
Chy10g00351 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 19 357 - -
Chy10g00351 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 337 555 - -
Chy10g00351 798 Gene3D Ribonuclease Inhibitor 266 328 IPR032675 -
Chy10g00351 798 SUPERFAMILY Protein kinase-like (PK-like) 555 739 IPR011009 -
Chy10g00351 798 MobiDBLite consensus disorder prediction 493 522 - -
Chy10g00351 798 SMART LRR_typ_2 142 166 IPR003591 -
Chy10g00351 798 SMART LRR_typ_2 239 262 IPR003591 -
Chy10g00351 798 SMART LRR_typ_2 339 363 IPR003591 -
Chy10g00351 798 SMART LRR_typ_2 387 410 IPR003591 -
Chy10g00351 798 SMART LRR_typ_2 315 338 IPR003591 -
Chy10g00351 798 SMART LRR_typ_2 291 314 IPR003591 -
Chy10g00351 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 555 743 - -
Chy10g00351 798 Gene3D Ribonuclease Inhibitor 329 426 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g00488 Chy-Chr7:3905248 Chy10g00351 Chy-Chr10:8781934 2.42E-21 dispersed
Chy10g00351 Chy-Chr10:8781934 Chy06g01584 Chy-Chr6:17955989 4.29E-10 dispersed
Chy10g00351 Chy-Chr10:8781934 Chy04g02286 Chy-Chr4:27406963 2.73E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71499 PF00069 Pkinase 2.50E-22 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00351 - - csv:101214895 958.362