Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00555 ATGGAGGGTTTGGGGAGGTTTTTGGTTTTGGCAAAGCCATATTTTGGAGTTCTTTTTATGCAATTGGGTTCAGCTGGAATGGCGATTATTGCAAAGTTTGCTTTGAACAAAGGGATGAGCCAATATGTTTTTGTGTTTTATCGTATGATTATTGCTACTGTTATCATGGCTCCTTTTGCCATCATCTTTGAAAGGAAAGTGAGGACGAAGATGACCATTTCGTTGGCCTTCAAGATTGTGATGCTTGGTCTACTTGAGCCAGTGATTGATCTCAACTTATACTTTACTGGTATGAAGTACACAACAGCAACCTTTGCAGTTGCGATGTGCAATGTTCTTCCTGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAGAGTGAATATTTGGAAAAGAGGAAGCCAAGCAAAAATAGTAGGAACCATAGTAACAATAGGAGGAGCCATGATTATGACATTCATAAGAGGACCCATGTTGAATCTGCCATGGACAAAACCCAACCACCCCTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCAATAAATCACCAAAACCAAATCAAGGGCTCCCTCATGATCACAATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGCAATTACATTGAAATTGTACCCGGCCGAGCTATCCCTTACAGCATTGATATGTTTAGTGGCAACCATTGGAGGCTGTTTGGTGGCTTTGGTCATGGAGAGAGGGAACCCTTCTGCTTGGGCTTTGCACTTTGATAGCCAGCTTCTATCTGTGGTTTATGCTGGTGTAATTTGTTCAGGGGTAACATATTATATTCAAGGAATGGTGATGCAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTATCCATGATTTTTGTTGCAATCATGAGCTCCTTCATCTTATCTGAGATTATGTTGTTGGGAAGGATTGTTGGAGCAGTGACCATAATCACTGGGTTGTACCTGGTTTTGTGGGGCAAAAGAAAAGATAAGCTTTTAGTTAAAGCAGACTCTGATGGTAAGCAACAAATGACTGAAACAGATGAGGCTTCGAAGAGGACGGTTCAACCGAGTCAAGAATTCATCTCGCTTGATGTTACCAGAGTGGAGACAAAATGA 1134 41.71 MEGLGRFLVLAKPYFGVLFMQLGSAGMAIIAKFALNKGMSQYVFVFYRMIIATVIMAPFAIIFERKVRTKMTISLAFKIVMLGLLEPVIDLNLYFTGMKYTTATFAVAMCNVLPAFAFLMAWACRLERVNIWKRGSQAKIVGTIVTIGGAMIMTFIRGPMLNLPWTKPNHPSSSSSSSSSSSINHQNQIKGSLMITIGCICQSAFIILQAITLKLYPAELSLTALICLVATIGGCLVALVMERGNPSAWALHFDSQLLSVVYAGVICSGVTYYIQGMVMQIKGPVFVTAFNPLSMIFVAIMSSFILSEIMLLGRIVGAVTIITGLYLVLWGKRKDKLLVKADSDGKQQMTETDEASKRTVQPSQEFISLDVTRVETK* 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12201738 12206735 + Chy10G177490.1 Chy10g00555 234930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00555 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 334 - -
Chy10g00555 377 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016021|GO:0022857
Chy10g00555 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Chy10g00555 377 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Chy10g00555 377 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Chy10g00555 377 PANTHER WAT1-RELATED PROTEIN 9 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00779 Chy-Chr8:15468048 Chy10g00555 Chy-Chr10:12201738 2.41E-143 dispersed
Chy09g00760 Chy-Chr9:10057546 Chy10g00555 Chy-Chr10:12201738 2.67E-142 dispersed
Chy09g00761 Chy-Chr9:10150361 Chy10g00555 Chy-Chr10:12201738 1.44E-106 dispersed
Chy09g00770 Chy-Chr9:10345353 Chy10g00555 Chy-Chr10:12201738 3.45E-64 dispersed
Chy10g00554 Chy-Chr10:12185618 Chy10g00555 Chy-Chr10:12201738 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00555 - - csv:101206072 703.745