Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00556 ATGTCTTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGACAGCTCCTCCAGAATTGAAACCAAACGTGGCCATCAATGGTTCATGGATGGCAGTGCACCAGAGCTATTCAGTAGCAAGAAGCAAGCAATTGAAGCTGTAAATTCTAGACCTGTTCCTGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACTCCAGTTTTCAGTCAGTCCCTGGACACTTCACTGATCGTCTTTTTGGCTCAGAGCCAATACGAACTGTTAACTTGGTTGATAGAGGCATTTCTGTGGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTTGAGAATCATTTTACAAACAACCCATCTGTTGGCCTGTCCATGTCTCAATCCATTGAGGATCCCTCATCATGCCTCAATTTTGGGGGAATTAGAAAAGTTAAAGTCAATCAAGTGAGGGATCCTGACGTTGGCTTGCCTGCTTCTTTGGGGCATGCCTATAGTAGGGGTGATAATTGTACAATTTCGATGGGTACAGGATTTAGCAAAAACCATGAGAACACCATATCATTGGACCAAACTTATAATAGTAGAGATGAGAATGCCATTTCGGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGGAGTTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCTTATCGATGAATCAGCCTTTTGACAAGGGGGATGACTCTTTTATTTCAATGGGTCAATCTTATGAGAAGGCTGAAGGAAATATCATCTCTTTTGCCTCCTACAATAAAGGGCAAGAAAATTTTATATCAATGGGGCCAGCCTATAGTAAGGCGGGTGATACTTTCATTTCAATGGCTTCATCCTTTAATAAGGGGAATGATGACAACTTATCCATGGCTCCCACCTATGACAAGGTGAACTCTGACATTGTACATGTTGGTCCTAAATTTGACAAAGCAGATTCTGGTGCTGTGTCAATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTTGATGACGAGAATGGGACAGATAATCCCTCTGGTGGGATCATTAGCAGTTATGACTTGTTAATGGCTAATCAGGCTTCTGCCCAGGCATCAGAAGTATCAACCCTGAGAGACTCGGTTGATCCCAATGTGGAAGTAAACATTAACAGTGCCATAAAGGTTGATGGAAAAATCGACACAAATTCCAAAAATAAAGAGCCGAGGATGAGTAAGAAGGTTCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCCACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATTAAAGGGACTGGATACTTGTGCAGTTGTGAGAACTGCAATCATTCAAAGGCTCTCAATGCTTATGAATTTGAGAGGCACGCTGGCTGCAAAACCAAACATCCAAACAACCATATTTACTTTGAGAATGGGAAAACTATCTATGCTGTTGTTCAAGAGCTGAAGAACACCCCTCAGGAGATGCTATTTGATGCAATCCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAACTTCCGTATTTGGAAAGCATCGTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAGGATGAAGTAATTATGCCTTCTTGA 1749 41.62 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIETKRGHQWFMDGSAPELFSSKKQAIEAVNSRPVPGVPHMNVSPWENSSFQSVPGHFTDRLFGSEPIRTVNLVDRGISVGNANMDMGRKEFENHFTNNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDPDVGLPASLGHAYSRGDNCTISMGTGFSKNHENTISLDQTYNSRDENAISVGPAYHKTDDNFISMGHAFSKGDGSFITIGHNYSKGDNSILSMNQPFDKGDDSFISMGQSYEKAEGNIISFASYNKGQENFISMGPAYSKAGDTFISMASSFNKGNDDNLSMAPTYDKVNSDIVHVGPKFDKADSGAVSMAHNYHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQASAQASEVSTLRDSVDPNVEVNINSAIKVDGKIDTNSKNKEPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCENCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVIMPS* 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12208002 12213252 - Chy10G177500.1 Chy10g00556 234931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00556 582 Pfam Tify domain binding domain 475 530 IPR032308 -
Chy10g00556 582 PANTHER AUTOIMMUNE REGULATOR 1 582 - -
Chy10g00556 582 MobiDBLite consensus disorder prediction 424 444 - -
Chy10g00556 582 PANTHER N-LYSINE METHYLTRANSFERASE 1 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00556 Chy-Chr10:12208002 Chy11g01276 Chy-Chr11:18967385 4.13E-29 dispersed
Chy10g00556 Chy-Chr10:12208002 Chy04g02130 Chy-Chr4:26555155 4.82E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00556 - - csv:101206313 1182.93