Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00590 ATGATACTCTCAGAGCCCCCTAAGAGTAACAACACCACCAAATTAATGCACATAAAAGAATTTTTTGGCTTCTCCCACTCTTCCTCTCCAAAATCCATCCACTCCTCTTCTACTTTCACCAACTCTCCTCGTCGGAGACTCCCGCCGCCGACCTATGACCCATCTGAGTCCGCTGCCATGGAAGAGGCCATCGTAAACTCAGAACCCATCATTACGAAATGGGACCCCGATGCTTCTGAGTTCAACAGAATCACCTTCCTCTTCCGCCATGGCAGAGCCGAATCTGAGGAGTTTCTCAACTCTGTCAACAGTCTACGACGAGCAATGGACTTCTTTATTTCGGCAAATTCCACCTCGTCCGTTCTTGTTATTGCTCAGAAGTTGATGCAGGCCGCTATGAGACGATTGGAGAAGGAGTTTTACCAGATTTTGAGTGAAAATCGGCAGAATCTCGATCCTGAATCCATCTCCAGCAGATCCTCTGACCGGTCAACGGCCGACGGGGAAACCGGTGGGGATTCTATAACTGAATTCGATAGAGTGTCGGCGGATTTGAAATCCATTGCGGATTGTATGATTGATTCTGGGTATGGGAAAGAGTGTGTTAAAATCTATAAAGTAATCCGAAAATCTATTGTTGATGAAACTCTGTACCGTCTGGGAACAGAGAAATTCAAACTTTCGAGAATTTTGAAATGGAATTGGGATTCGCTCGAGAACATAATCAAGAACTGGATGAACTCGGTTAAAATCGCGGTGAATACTCTGTTTCGTGGCGAAAGATTTCTCTGCGACCACGTTTTTTCGAGATCGGAAAGAATCAGAGAGTCCTGTTTTTATGAGATCACAAAAGAAGGTGCAATCACTTTATTCAAATTCCCGGAATTAGTCGCAAAAGGGAAGAAAGATTCCGACAAAATTTTCATATTAATGGAGCTTTACGACGCGAATTCTGACGTATTACCGGAAATCGAGCTCATATTCGACTCTGTCTCAACGTCCGTCATTAGAACCCAAGCGCAAACGTCAATGACGAAACTCGCTGATTCAATCCGCGACATCCTTTCCGAATTCGAATCAACAATTCAAAAAGATTCATCAAAAAACCCAACTCCCGGCGGCGGAATCCACCCATTAACCCAATCAGCAATGAGTTACATCTCCTCCCTCGGAGATTACGCCTCAACCATCTCCGACATCCTCACCGTCGAAAACTCCCCAATTCCGTCGTCATACATGGAAACCATCGCCGCCGACGACGCACTCTCATCGCCGGTGGCTGCGCAACTGGGCTGGCTAATTCTAGTCCTTCTATGTAAACTAGACACAAAAGCGGAGGTATACAGAGACGTATCGTTATCATACTTATTCCTAGCAAACAACTTGAATTTCATCGTGAAAACGGTGGCGACGACGAATCTAAAGATGCTAATCGGTGGCGAGTGGGTGGCGAATCATAGAACCAAAGTGAAGGTGTATGCAACGAACTACGAAGCGACGGCGTGGAACAGAGTGATAAAGTCGTTGCCGGAGAGGGGGTCTGAAGAAGTGGGGTCACCGGAGATGGCGGCGGAGGGGTTGAAGAGGTTTAATGCGGCGTTTGAAGAGGCTTATCGAAAACAAACGTCCTGGAGAGTGGAGGACGGGAATCTGAGAGATGAACTGAAGGTGTCGATAGCGAGAAAAATAGTGCCGATCTACAGAGAGTTTTACGAGGGATGTATTGAGAGAATGAATGTGAATGAGGGCGTGAGATTTTCGCCGGATGATTTGGGGAACTATTTGTCGGATTTGTTTCATGGGGTTTCTTCTTCGGGGAGTTCTTCATCATCATCTTCTTCTTCTGCACTGAAGAGATGA 1860 46.18 MILSEPPKSNNTTKLMHIKEFFGFSHSSSPKSIHSSSTFTNSPRRRLPPPTYDPSESAAMEEAIVNSEPIITKWDPDASEFNRITFLFRHGRAESEEFLNSVNSLRRAMDFFISANSTSSVLVIAQKLMQAAMRRLEKEFYQILSENRQNLDPESISSRSSDRSTADGETGGDSITEFDRVSADLKSIADCMIDSGYGKECVKIYKVIRKSIVDETLYRLGTEKFKLSRILKWNWDSLENIIKNWMNSVKIAVNTLFRGERFLCDHVFSRSERIRESCFYEITKEGAITLFKFPELVAKGKKDSDKIFILMELYDANSDVLPEIELIFDSVSTSVIRTQAQTSMTKLADSIRDILSEFESTIQKDSSKNPTPGGGIHPLTQSAMSYISSLGDYASTISDILTVENSPIPSSYMETIAADDALSSPVAAQLGWLILVLLCKLDTKAEVYRDVSLSYLFLANNLNFIVKTVATTNLKMLIGGEWVANHRTKVKVYATNYEATAWNRVIKSLPERGSEEVGSPEMAAEGLKRFNAAFEEAYRKQTSWRVEDGNLRDELKVSIARKIVPIYREFYEGCIERMNVNEGVRFSPDDLGNYLSDLFHGVSSSGSSSSSSSSSALKR* 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12514619 12516478 - Chy10G177840.1 Chy10g00590 234965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00590 619 SUPERFAMILY Cullin repeat-like 68 600 IPR016159 -
Chy10g00590 619 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 46 611 - -
Chy10g00590 619 MobiDBLite consensus disorder prediction 152 171 - -
Chy10g00590 619 Pfam Exo70 exocyst complex subunit 243 597 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy10g00590 619 Gene3D Exocyst complex component Exo70 77 608 - -
Chy10g00590 619 MobiDBLite consensus disorder prediction 26 55 - -
Chy10g00590 619 MobiDBLite consensus disorder prediction 26 45 - -
Chy10g00590 619 MobiDBLite consensus disorder prediction 152 175 - -
Chy10g00590 619 PANTHER EXOCYST COMPLEX PROTEIN EXO70 46 611 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00590 Chy-Chr10:12514619 Chy12g00132 Chy-Chr12:1479268 0 dispersed
Chy01g02114 Chy-Chr1:25847708 Chy10g00590 Chy-Chr10:12514619 9.17E-37 transposed
Chy10g00590 Chy-Chr10:12514619 Chy04g02117 Chy-Chr4:26479891 1.62E-169 wgd
Chy10g00590 Chy-Chr10:12514619 Chy08g00789 Chy-Chr8:15529608 1.34E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00590 K07195 - csv:101221801 1149.04