Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy10g00590 | ATGATACTCTCAGAGCCCCCTAAGAGTAACAACACCACCAAATTAATGCACATAAAAGAATTTTTTGGCTTCTCCCACTCTTCCTCTCCAAAATCCATCCACTCCTCTTCTACTTTCACCAACTCTCCTCGTCGGAGACTCCCGCCGCCGACCTATGACCCATCTGAGTCCGCTGCCATGGAAGAGGCCATCGTAAACTCAGAACCCATCATTACGAAATGGGACCCCGATGCTTCTGAGTTCAACAGAATCACCTTCCTCTTCCGCCATGGCAGAGCCGAATCTGAGGAGTTTCTCAACTCTGTCAACAGTCTACGACGAGCAATGGACTTCTTTATTTCGGCAAATTCCACCTCGTCCGTTCTTGTTATTGCTCAGAAGTTGATGCAGGCCGCTATGAGACGATTGGAGAAGGAGTTTTACCAGATTTTGAGTGAAAATCGGCAGAATCTCGATCCTGAATCCATCTCCAGCAGATCCTCTGACCGGTCAACGGCCGACGGGGAAACCGGTGGGGATTCTATAACTGAATTCGATAGAGTGTCGGCGGATTTGAAATCCATTGCGGATTGTATGATTGATTCTGGGTATGGGAAAGAGTGTGTTAAAATCTATAAAGTAATCCGAAAATCTATTGTTGATGAAACTCTGTACCGTCTGGGAACAGAGAAATTCAAACTTTCGAGAATTTTGAAATGGAATTGGGATTCGCTCGAGAACATAATCAAGAACTGGATGAACTCGGTTAAAATCGCGGTGAATACTCTGTTTCGTGGCGAAAGATTTCTCTGCGACCACGTTTTTTCGAGATCGGAAAGAATCAGAGAGTCCTGTTTTTATGAGATCACAAAAGAAGGTGCAATCACTTTATTCAAATTCCCGGAATTAGTCGCAAAAGGGAAGAAAGATTCCGACAAAATTTTCATATTAATGGAGCTTTACGACGCGAATTCTGACGTATTACCGGAAATCGAGCTCATATTCGACTCTGTCTCAACGTCCGTCATTAGAACCCAAGCGCAAACGTCAATGACGAAACTCGCTGATTCAATCCGCGACATCCTTTCCGAATTCGAATCAACAATTCAAAAAGATTCATCAAAAAACCCAACTCCCGGCGGCGGAATCCACCCATTAACCCAATCAGCAATGAGTTACATCTCCTCCCTCGGAGATTACGCCTCAACCATCTCCGACATCCTCACCGTCGAAAACTCCCCAATTCCGTCGTCATACATGGAAACCATCGCCGCCGACGACGCACTCTCATCGCCGGTGGCTGCGCAACTGGGCTGGCTAATTCTAGTCCTTCTATGTAAACTAGACACAAAAGCGGAGGTATACAGAGACGTATCGTTATCATACTTATTCCTAGCAAACAACTTGAATTTCATCGTGAAAACGGTGGCGACGACGAATCTAAAGATGCTAATCGGTGGCGAGTGGGTGGCGAATCATAGAACCAAAGTGAAGGTGTATGCAACGAACTACGAAGCGACGGCGTGGAACAGAGTGATAAAGTCGTTGCCGGAGAGGGGGTCTGAAGAAGTGGGGTCACCGGAGATGGCGGCGGAGGGGTTGAAGAGGTTTAATGCGGCGTTTGAAGAGGCTTATCGAAAACAAACGTCCTGGAGAGTGGAGGACGGGAATCTGAGAGATGAACTGAAGGTGTCGATAGCGAGAAAAATAGTGCCGATCTACAGAGAGTTTTACGAGGGATGTATTGAGAGAATGAATGTGAATGAGGGCGTGAGATTTTCGCCGGATGATTTGGGGAACTATTTGTCGGATTTGTTTCATGGGGTTTCTTCTTCGGGGAGTTCTTCATCATCATCTTCTTCTTCTGCACTGAAGAGATGA | 1860 | 46.18 | MILSEPPKSNNTTKLMHIKEFFGFSHSSSPKSIHSSSTFTNSPRRRLPPPTYDPSESAAMEEAIVNSEPIITKWDPDASEFNRITFLFRHGRAESEEFLNSVNSLRRAMDFFISANSTSSVLVIAQKLMQAAMRRLEKEFYQILSENRQNLDPESISSRSSDRSTADGETGGDSITEFDRVSADLKSIADCMIDSGYGKECVKIYKVIRKSIVDETLYRLGTEKFKLSRILKWNWDSLENIIKNWMNSVKIAVNTLFRGERFLCDHVFSRSERIRESCFYEITKEGAITLFKFPELVAKGKKDSDKIFILMELYDANSDVLPEIELIFDSVSTSVIRTQAQTSMTKLADSIRDILSEFESTIQKDSSKNPTPGGGIHPLTQSAMSYISSLGDYASTISDILTVENSPIPSSYMETIAADDALSSPVAAQLGWLILVLLCKLDTKAEVYRDVSLSYLFLANNLNFIVKTVATTNLKMLIGGEWVANHRTKVKVYATNYEATAWNRVIKSLPERGSEEVGSPEMAAEGLKRFNAAFEEAYRKQTSWRVEDGNLRDELKVSIARKIVPIYREFYEGCIERMNVNEGVRFSPDDLGNYLSDLFHGVSSSGSSSSSSSSSALKR* | 620 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 12514619 | 12516478 | - | Chy10G177840.1 | Chy10g00590 | 234965 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy10g00590 | 619 | SUPERFAMILY | Cullin repeat-like | 68 | 600 | IPR016159 | - | |
Chy10g00590 | 619 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 46 | 611 | - | - | |
Chy10g00590 | 619 | MobiDBLite | consensus disorder prediction | 152 | 171 | - | - | |
Chy10g00590 | 619 | Pfam | Exo70 exocyst complex subunit | 243 | 597 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Chy10g00590 | 619 | Gene3D | Exocyst complex component Exo70 | 77 | 608 | - | - | |
Chy10g00590 | 619 | MobiDBLite | consensus disorder prediction | 26 | 55 | - | - | |
Chy10g00590 | 619 | MobiDBLite | consensus disorder prediction | 26 | 45 | - | - | |
Chy10g00590 | 619 | MobiDBLite | consensus disorder prediction | 152 | 175 | - | - | |
Chy10g00590 | 619 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 46 | 611 | IPR004140 | GO:0000145|GO:0006887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy10g00590 | Chy-Chr10:12514619 | Chy12g00132 | Chy-Chr12:1479268 | 0 | dispersed | |
Chy01g02114 | Chy-Chr1:25847708 | Chy10g00590 | Chy-Chr10:12514619 | 9.17E-37 | transposed | |
Chy10g00590 | Chy-Chr10:12514619 | Chy04g02117 | Chy-Chr4:26479891 | 1.62E-169 | wgd | |
Chy10g00590 | Chy-Chr10:12514619 | Chy08g00789 | Chy-Chr8:15529608 | 1.34E-124 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy10g00590 | K07195 | - | csv:101221801 | 1149.04 |