Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00608 ATGGTATCTGAAACTTTTATGAAGATTGTATCACCTTGCTGGAAACCGTTAGTCGAAGGCGAAAATTCCAGCAGAGATGGGGATGCAAGTGGTCGGGTTGATGGGCTGTTGTGGTACAAGGATTCTGGCCGCCATATTAATGGTGATTTCTCAATGGCAGTTATTCAGGCAAATAATTTGTTGGAAGATCGTAGCCAACTTGAGTCAGGGCCTCTGAGCTCATATGAATCGGGTCCGGTTGGAACGTTCGTTGGAATTTATGATGGCCACGGAGGACCAGAAGCTGCACAATTCATAAATGATCGACTTTTCAATAATATGAAGACTTTTCATGATGCAGAATTTATTCCAGAAAATCGGGGAGTATCTGCTGAAATTATTAACAAAGCGTTCTTGGAGACGGAGGAGGAATTTTTGTCTCTTGTAAAGAAACAATGGCTTATTAAGCCTCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCGTAATATGTTGTGGATTACTATATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGAAGATTTGAAAGAACTCATAAAGAGGTTAAAGCCATCCAATTGTCATCTGAGCACAATGCTAGTATTGAATCTGTGAGAGAGGAGTTGCACTCGTTGCATCCCAATGATCCACAGATCGTGGTGCTAAAGCACAAGGTGTGGCGTGTGAAGGGTGTTATACAGGTCTCAAGATCCCTTGGTGATGCTTATCTGAAGAAAACAGAGTTCAACCGAGAGCCTCTTTTGCCAAAGTTCAGATTACCAGAACCATTCCACAAGCCAATACTTAAAGCTGAGCCTGCTATTGTCGTGCAGAAACTGTATCCAGAGGATCAGTTTCTTATATTTGCTTCAGATGGTCTTTGGGAGTATATAAGCAATCAGGAAGCTGTCGACATCGTCCATAGTTGTCCACGTAATGGGGTTGCAAGGAAACTCGTTAAAGCCGCTCTTCATGGAGCTGCCAAAAAAAGAGAGATGAGATACACAGACTTGAAGAAGATTGATCGCGGGGTAAGAAGGCATTTTCACGACGACATCACTGTGATAGTTTTGTTCCTCGATTCGCATCTGATTAGTCGCAGTCCAAGCTACGGACCAATGCTTTCAATAAGAGGAGGTTCTGGTATCCTCGCTAGATCATAG 1170 42.99 MVSETFMKIVSPCWKPLVEGENSSRDGDASGRVDGLLWYKDSGRHINGDFSMAVIQANNLLEDRSQLESGPLSSYESGPVGTFVGIYDGHGGPEAAQFINDRLFNNMKTFHDAEFIPENRGVSAEIINKAFLETEEEFLSLVKKQWLIKPQIASVGSCCLVGVICCGLLYIANAGDSRVVLGRFERTHKEVKAIQLSSEHNASIESVREELHSLHPNDPQIVVLKHKVWRVKGVIQVSRSLGDAYLKKTEFNREPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVHSCPRNGVARKLVKAALHGAAKKREMRYTDLKKIDRGVRRHFHDDITVIVLFLDSHLISRSPSYGPMLSIRGGSGILARS* 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12662172 12665882 + Chy10G178020.1 Chy10g00608 234983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00608 389 ProSiteProfiles PPM-type phosphatase domain profile. 49 362 IPR001932 -
Chy10g00608 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Chy10g00608 389 Gene3D - 39 370 IPR036457 -
Chy10g00608 389 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 384 - -
Chy10g00608 389 SUPERFAMILY PP2C-like 44 363 IPR036457 -
Chy10g00608 389 Pfam Protein phosphatase 2C 82 329 IPR001932 -
Chy10g00608 389 CDD PP2Cc 50 362 IPR001932 -
Chy10g00608 389 SMART PP2C_4 39 360 IPR001932 -
Chy10g00608 389 PANTHER ALPHABET, ISOFORM E-RELATED 8 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00538 Chy-Chr2:3239014 Chy10g00608 Chy-Chr10:12662172 8.08E-178 dispersed
Chy10g00608 Chy-Chr10:12662172 Chy11g00244 Chy-Chr11:2291313 0 dispersed
Chy10g00608 Chy-Chr10:12662172 Chy04g02107 Chy-Chr4:26420099 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00608 K01102 - csv:101220760 774.237