Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00609 ATGGCAACTTTGACACTGGGCAGCACCATTGGCTTCTCCTACTCTTCGTCTTCCTCAGACATCTCTGCTTATTGTATTCCCTCTTCAACCACCAGATTCAGCTTCTCCAGCATCATTCCTTCTCCTCTCAAACTTCAAAAACAACCATCTGGAAGAAGAGCTAGAGCTCTAATTGCTGTGAAAATGGCTGCTCAAGCTTTCCAGGAAGTTCTTCCTCCAGCCCTCAATTCAGTTTCAGAACCACCTCCTATCTTCGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCACAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCCATAAATCTACAGGATAGGCCTTCATGGTACAAGGAAAAAGTTTACCCACCTAACAAGGTTCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGGCCTTCATTATTTCCTGATGAGCCAGAAAAGAGAGAGTTTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCATTTGACTACATCGAGTCCGCTCTTTCTAAATATGGAGATGGTCCATTTTTCCTAGGCCAGTTCAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCGGCCGTTCTTATTGGAAGTAAAAACGTATGACATCACTGCTGGCAGGCCAAAACTGGCAGCTTGGATTGAGGAGATGAACAAGATCGAGGGGTACCGACAAACAAGGCGCGATCCACAGGAACATGTTGATAGTTATAAGAAGCGATTTTTGAGCCGTTTGTGA 894 42.51 MATLTLGSTIGFSYSSSSSDISAYCIPSSTTRFSFSSIIPSPLKLQKQPSGRRARALIAVKMAAQAFQEVLPPALNSVSEPPPIFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYKEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDEPEKREFAEELINYVNSFTGSVVSSFKGDGNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERFRPFLLEVKTYDITAGRPKLAAWIEEMNKIEGYRQTRRDPQEHVDSYKKRFLSRL* 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12668897 12674866 + Chy10G178030.1 Chy10g00609 234984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00609 297 SUPERFAMILY Thioredoxin-like 81 169 IPR036249 -
Chy10g00609 297 CDD GST_C_Lambda 173 290 - -
Chy10g00609 297 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 30 294 - -
Chy10g00609 297 Gene3D Glutaredoxin 62 165 - -
Chy10g00609 297 Gene3D - 166 297 - -
Chy10g00609 297 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Chy10g00609 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 30 294 IPR044629 GO:0004364
Chy10g00609 297 SFLD Glutathione Transferase (cytosolic) 91 270 IPR040079 -
Chy10g00609 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Chy10g00609 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Chy10g00609 297 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02105 Chy-Chr4:26412294 Chy10g00609 Chy-Chr10:12668897 2.84E-110 dispersed
Chy10g00609 Chy-Chr10:12668897 Chy06g00410 Chy-Chr6:2764519 5.05E-08 dispersed
Chy06g01363 Chy-Chr6:13574960 Chy10g00609 Chy-Chr10:12668897 1.46E-08 transposed
Chy10g00583 Chy-Chr10:12458940 Chy10g00609 Chy-Chr10:12668897 3.22E-10 transposed
Chy10g00609 Chy-Chr10:12668897 Chy04g02103 Chy-Chr4:26402922 3.60E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00609 K00799 - csv:101220995 563.148