Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00613 ATGGGGTGGTTTCTGTGTTCAGGAATTTCAAATAAGAAGGAAAAACAGCAGCAGCAGCAGCAAGTACACAAGAAGGACGATGATCCGATCCCATCAACTTCAGATGCAGAAAAATTGATGGTAAAGGCTACATTTAATGGGAAGAACGATACTCTGAAAGATGGAGGTGCTGATCAAATTGCAGGACAAACAATTACCTTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCTGACTGCCTTTTAGGTGAAGGAGGTTTTGGTCAAGTTTATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTCCTTGTTGAAGTACTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGCGCGGATGGTGATCAAAGACTTTTGGTTTATGAATACATGCCATTGGGATCGTTGGAAGACCATTTACATGATCTCCCACCCGATAAAAAACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAGGGCTTAGAGTATTTGCATGACAAGGCTAATCCCCCAGTTATATATCGTGATCTGAAGTGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGTTATCTGATTTTGGCTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACGAGGGTGATGGGAACATATGGATACTGTGCTCCAGAGTATGCAATGACAGGCCAGCTCACTTTAAAATCAGACGTTTATAGCTTTGGAGTTGTTCTACTCGAAATTATTACTGGGAGAAAAGCTATTGACAATTCAAGAGCTGCAGGGGAACATAATTTGGTGGCATGGGCACAACCCTTATTTAAAGACCGAAGGAAATTTTCCCAGATGGCGGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTGTATCAAGCACTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCACTTATTGCTGATGTTGTCACAGCTCTTACATACCTTGCCTCCCAAAAATACGACCCCGAAACCCAGCCAGTTCAAAGCGCTCGCAGTAGCTCATCCACACCTAGATCTTCTAGAAGAGAACTGTGA 1158 43.26 MGWFLCSGISNKKEKQQQQQQVHKKDDDPIPSTSDAEKLMVKATFNGKNDTLKDGGADQIAGQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALTYLASQKYDPETQPVQSARSSSSTPRSSRREL* 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12711144 12715028 + Chy10G178070.1 Chy10g00613 234988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00613 385 MobiDBLite consensus disorder prediction 6 33 - -
Chy10g00613 385 SUPERFAMILY Protein kinase-like (PK-like) 67 374 IPR011009 -
Chy10g00613 385 MobiDBLite consensus disorder prediction 17 33 - -
Chy10g00613 385 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
Chy10g00613 385 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 12 382 - -
Chy10g00613 385 SMART serkin_6 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00613 385 Gene3D Phosphorylase Kinase; domain 1 51 155 - -
Chy10g00613 385 Pfam Protein tyrosine and serine/threonine kinase 84 351 IPR001245 GO:0004672|GO:0006468
Chy10g00613 385 MobiDBLite consensus disorder prediction 363 385 - -
Chy10g00613 385 PANTHER OS07G0668900 PROTEIN 12 382 - -
Chy10g00613 385 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00613 385 MobiDBLite consensus disorder prediction 363 378 - -
Chy10g00613 385 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Chy10g00613 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Chy10g00613 385 CDD STKc_IRAK 85 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00613 Chy-Chr10:12711144 Chy11g01290 Chy-Chr11:19071984 8.17E-166 dispersed
Chy03g00614 Chy-Chr3:8712499 Chy10g00613 Chy-Chr10:12711144 1.06E-162 transposed
Chy07g00395 Chy-Chr7:3164790 Chy10g00613 Chy-Chr10:12711144 1.20E-163 transposed
Chy11g00819 Chy-Chr11:11719844 Chy10g00613 Chy-Chr10:12711144 1.11E-70 transposed
Chy11g01816 Chy-Chr11:24519828 Chy10g00613 Chy-Chr10:12711144 0 transposed
Chy12g00891 Chy-Chr12:14274954 Chy10g00613 Chy-Chr10:12711144 0 transposed
Chy10g00613 Chy-Chr10:12711144 Chy04g02100 Chy-Chr4:26381217 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71501 PF07714 PK_Tyr_Ser-Thr 1.80E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00613 - - csv:101221705 734.176