Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00651 ATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGGCGCTACCATCGACACTCACAAGAATCACTCCTCTTCCAATGGAGCTCTCGTTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCTATCATCTGTGCTGCTCGAGTTTTCCAGCTCACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCTGAACCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAACCTCTTTCCGGTCCCACGCCGTTTATTCTTGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGCCTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCTGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGGCCAGGTTTGGAGTTTTGCTGCCGCCGCTCCGTCGGAGATGGTGGTTCAACCAGGGGGGATTTCTCAACAAGCTTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGCTAA 771 52.14 MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR* 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13031263 13032033 + Chy10G178450.1 Chy10g00651 235026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00651 256 MobiDBLite consensus disorder prediction 1 30 - -
Chy10g00651 256 MobiDBLite consensus disorder prediction 33 47 - -
Chy10g00651 256 MobiDBLite consensus disorder prediction 1 47 - -
Chy10g00651 256 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 253 IPR005333 GO:0003700
Chy10g00651 256 Pfam TCP family transcription factor 36 121 IPR017887 -
Chy10g00651 256 ProSiteProfiles TCP domain profile. 36 90 IPR017887 -
Chy10g00651 256 MobiDBLite consensus disorder prediction 109 135 - -
Chy10g00651 256 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 253 - -
Chy10g00651 256 MobiDBLite consensus disorder prediction 109 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00651 Chy-Chr10:13031263 Chy10g00749 Chy-Chr10:13690054 2.14E-39 dispersed
Chy10g00651 Chy-Chr10:13031263 Chy10g00992 Chy-Chr10:15398882 2.07E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18571 PF03634 TCP 1.60E-32 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00651 K16221 - csv:101206050 432.18