Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00655 ATGGGTGGATTTAACTTAAAGATCTATCGAAGAAGCAGTTTTAACTGTGATCGGAAGATGTCTCGGAAATCCCAGGTGATGGTTTCACTGCAGTCCATCAAATCCATGCCAGTTAATTCTCGGTTTATGATTCCACAAGCTGCTGAAAATTTGGAAGATCCTTACAGTCGGAATGTGAAAAACATGGAAGCTAATTCGATAGTTGATGGTGAAAATGGTGCTGTGGGAGATGATGCCGTCAATCGACATCAATACGGTACGAACAGTATTGATGAGCTGAATGAGGACTCACCATATAATTGTAATACTACATCGGTGGGAGAAAGACCCACTATGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAGTATCGGCTTCACATAGTGAACGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTTCAGTCTTGGTTTAAACTTCCAAATGGGAATTGGGATCTTGTAAAGATACTATCAACGACAGGAACAGAGTCAGTAGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAAATTTGATTCCAGCAAATCCGGATATTCTTGATGGTGTCGATGATCTTATGCAACTTAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATGTTATATATACAAAAGCAGGGCCAGTTCTGGTTGCCATCAATCCTTTTAAGAAAGTCGATTTGTATGGAAACGATTACATTGATGCATACAAGCGCAAAACAACTGATAGCCCACACGTATATGCCATTACTGATACAGCCATAAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTATAATAAGCGGTGAAAGTGGAGCTGGGAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCTACTCTTGGTGGTGGAAGTGGAATAGAATATGAGATATTAAAGACCAATCCTATCCTAGAAGCTTTTGGGAATGCAAAAACATTGAGAAATGATAACTCAAGCCGTTTTGGAAAGTTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCTGGTGCAAATATTCAAACTTTTTTGCTTGAAAAGTCTAGAGTTGTCCAATGCACGGAAGGAGAAAGGTCATATCACATCTTTTATCAACTTTGTAGTGGGGCTTCACCTGCACTCAAAGAGAAGTTAAACTTGAGAAGAGCGGAAGAGTACAAATATCTCTGCCAAAGCAGTTGTTTTTCAATAAGTAGGGTAAATGATGCTGAGGAGTTTCGTGTAGTCATGGAAGCACTGGATGTTGTCCATATCAGCAAAGAAGACCAGAACAGTGTATTTGCAATGCTTGCTGCTGTTCTTTGGCTGGGAAATGTTTCCTTTAGTGTTATAGACAATGAGAATCATGTGGAGCCAGTGGAAGATGAAGGTTTACAGACTGTTGCTAAGCTGATTGAGTGTGAGATTGAGGAGCTTAAACTAGCATTATCAACTCGAAAAATGAGAGTTGGGAATGACAGCATTGTCCAAAAGCTTACCTTATCTCAGGCAATTGACACAAGAGATGCTTTGGCAAAGTCAATCTACGCTTGTTTGTTTGAGTGGCTGGTTGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGACGCACTGGCAGATCCATAAGCATTCTTGATATCTATGGCTTTGAATCATTTGATAGGAATAGTTTTGAACAGTTCTGTATTAACTATGCAAATGAGAGACTACAGCAGCATTTCAATCGTCATTTATTTAAGCTAGAGCAGGAGGAATATATTCAAGATGGCATCGATTGGGCAAAAGTTGATTTTGACGACAATCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGACGAGGAGTCTACTTTTCCAAATGGCACAGATCTGACCTTCGCGAACAAGCTCAAGCAGCATTTGGGTCCTAATTCATCGTTTAGAGGAGAACGAGGGAAAGCCTTCACTGTCTGTCATTATGCAGGAGAGGTCACTTATGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCTATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCAGATTTTTGCATCCAACATGTTAACTCAATCGGAAAAGTCCATAGGTGGCACTTTACACAAGTCTGGTGGTGCAGAATCCCAAAAATTAAGTGTTGCTAGGAAGTTTAAGGGTCAATTATTCCAATTGATGCTCCGTCTTGAAAATACAACACCCCATTTCATCCGTTGTATAAAGCCCAACAACATTCAATCTCCCAGATTGTATGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCTACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTTCTACAAGAAAGCATTGCATCACAGGATCCCCTTAGTGTCTCAGTCGCAATTCTTCATCAATTCAATATATTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTTTTCCGAACTGGGCAGATTGGAGTGCTTGAAGATACAAGGAACCGCACGCTTCATGGTATTCTTTCTGTTCAAAGCTGTTACAGAGGGCACCTGGCTCGACGCCACCTTAAAGAGCTAAAGAGAGGGATTTCTGTACTTCAGTCATTTGCGCGTGGGGAGAAAGCAAGAAAAGAATATGCAATCTTGATACAAAGGCATAGGGCTGCTATTTCTATTCAAAAGAGCGTGAAAGCCAGAATTGCTAGTAAACATTTGAAGAATGTCGGTGATGCATCACTTACGATACAATCAGTTATCCGTGGCTGGTTGGTCAGGAGATGCTCAGGAGATATTGGATTAATGAAACCTGGTGGCTTGACGGCAAATGGGTCAGGTGAAGTGCTTGTTAAGTCATCATTCCTTGCAGAATTACAACGTCGTGTCCTGAAAGCAGAGGCTGCTTTGAGAGAGAAAGAAGAGGAAAATGACATCCTCCATCAGCGCCTCCAACAGTATGAGAACCGTTGGTCAGAGTATGAGCTGAAAATGAAGTCAATGGAAGAGGTATGGCAGAGACAAATGAGATCCCTGCAATCTAGCCTCTCCATTGCAAAGAAAAGCTTAGCAGTTGATGATTCAGAGAGAAATTCTGATGCATCGGTAAATGCAAGTGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAGCTAATGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGCGTCATTAGCCGATTGGCTGAAGAATTCGAACAAAGAAGTCAAGTCTTTGGCGATGACGCAAAGTTCTTAGTAGAGGTAAAATCCGGTCAAGTTGAGGCAAGTCTTGACCCAGATAGAGAACTAAGAAGGTTGAAACAAATGTTTGAAGCATGGAAGAAAGATTACGGAGGAAGGCTGCGTGAAACGAAAGTGATTTTGACTAAGCTTGGGAATGAAGGTGCCATGGATAGAGTGAAAAAGAAATGGTGGGGAAGGAGGAACAGCACAAGGTATAGTTAA 3585 40.95 MGGFNLKIYRRSSFNCDRKMSRKSQVMVSLQSIKSMPVNSRFMIPQAAENLEDPYSRNVKNMEANSIVDGENGAVGDDAVNRHQYGTNSIDELNEDSPYNCNTTSVGERPTMDDGEDGFMPLPSPSVSASHSERRWGDTSSYTPRKILQSWFKLPNGNWDLVKILSTTGTESVVSLTDGKVLKVKAENLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDVIYTKAGPVLVAINPFKKVDLYGNDYIDAYKRKTTDSPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLATLGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCTEGERSYHIFYQLCSGASPALKEKLNLRRAEEYKYLCQSSCFSISRVNDAEEFRVVMEALDVVHISKEDQNSVFAMLAAVLWLGNVSFSVIDNENHVEPVEDEGLQTVAKLIECEIEELKLALSTRKMRVGNDSIVQKLTLSQAIDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLGPNSSFRGERGKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSEKSIGGTLHKSGGAESQKLSVARKFKGQLFQLMLRLENTTPHFIRCIKPNNIQSPRLYEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQESIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILSVQSCYRGHLARRHLKELKRGISVLQSFARGEKARKEYAILIQRHRAAISIQKSVKARIASKHLKNVGDASLTIQSVIRGWLVRRCSGDIGLMKPGGLTANGSGEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILTKLGNEGAMDRVKKKWWGRRNSTRYS* 1195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13051188 13064761 + Chy10G178490.1 Chy10g00655 235030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00655 1194 MobiDBLite consensus disorder prediction 1061 1094 - -
Chy10g00655 1194 Gene3D Myosin VI head, motor domain, U50 subdomain 437 545 - -
Chy10g00655 1194 Pfam Myosin head (motor domain) 200 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 SMART MYSc_2a 192 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 Gene3D - 568 760 - -
Chy10g00655 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 918 IPR027417 -
Chy10g00655 1194 MobiDBLite consensus disorder prediction 1078 1094 - -
Chy10g00655 1194 SMART iq_5 943 965 IPR000048 GO:0005515
Chy10g00655 1194 SMART iq_5 871 893 IPR000048 GO:0005515
Chy10g00655 1194 SMART iq_5 894 916 IPR000048 GO:0005515
Chy10g00655 1194 SMART iq_5 920 942 IPR000048 GO:0005515
Chy10g00655 1194 CDD MYSc_Myo8 212 858 IPR036022 -
Chy10g00655 1194 PANTHER MYOSIN 30 1192 - -
Chy10g00655 1194 PRINTS Myosin heavy chain signature 228 247 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 PRINTS Myosin heavy chain signature 609 637 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 PRINTS Myosin heavy chain signature 282 307 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 PRINTS Myosin heavy chain signature 556 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 PRINTS Myosin heavy chain signature 324 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 Gene3D - 876 922 - -
Chy10g00655 1194 Gene3D - 923 964 - -
Chy10g00655 1194 Gene3D - 804 871 - -
Chy10g00655 1194 ProSiteProfiles Myosin motor domain profile. 198 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 30 1192 - -
Chy10g00655 1194 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Chy10g00655 1194 Gene3D Kinesin motor domain 197 803 IPR036961 -
Chy10g00655 1194 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 145 194 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy10g00655 1194 Gene3D - 380 436 - -
Chy10g00655 1194 Coils Coil 990 1038 - -
Chy10g00655 1194 Pfam IQ calmodulin-binding motif 877 893 IPR000048 GO:0005515
Chy10g00655 1194 Pfam IQ calmodulin-binding motif 897 915 IPR000048 GO:0005515
Chy10g00655 1194 Pfam IQ calmodulin-binding motif 946 962 IPR000048 GO:0005515
Chy10g00655 1194 ProSiteProfiles IQ motif profile. 874 900 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00597 Chy-Chr4:6590487 Chy10g00655 Chy-Chr10:13051188 0 dispersed
Chy10g00655 Chy-Chr10:13051188 Chy11g01878 Chy-Chr11:24995218 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00655 - K10357 csv:101222101 2278.44