Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy10g00749 | ATGGCTTCCACTTCAGCTTCCTCCGCCTCCACCCACCACCTCGACGCATCACTCGTCATCGCTACCAGATCAGACACAACCGCCGCCGCCGATCCTTCTCCTCGATCTACCTCTACTGCCAACGCTGCTAACAAGCGTTCTACTAAAGATCGTCACACGAAAGTCGAAGGTCGTGGCCGTCGTATCCGTATGCCGGCGACTTGTGCAGCTAGGGTTTTCCAATTGACGCGTGAATTAGGCCATAAATCCGACGGTGAGACTATTGAGTGGCTTCTTCAACAAGCTGAGCCGGCTATAATTGCGGCCACTGGTACTGGTACAATTCCGGCTAATTTCTCCTCCTTGAATATCTCGATTCGTAGTAGTGGATCTACTCTCTCTGCTCCTCCTTCCAAATCCGCTCCTCATTCCTTTCATGGCGCTGCTTTGGCTCTCGCTCATCATCCCCACGCTTACGAAGAAGGCTTCGCACATGCTGCTCTGTTAGGGTTTCACCACCAGCAACAGCAACAACAACAGCATCAGCTCAATTTAATGACCGCTGATCAAATCGGCGAAGGGTTACCTAGCGGCGGAGGAGAATCGACGGATAACTATATGAGAAAACGATTCAGAGAGGATTTGTTTAAAGAAGATACACAATCTCCAGGGGAAAGTAGTGGAGGCGGTGGATCTCCTAAAGCAATGAAGACCGATCTGCAATTAGAGAAACAACAACAACAACAACAACAACCATCAGCGTCTTCATCGGGACTACTCCGGCCCGGGGCGGCGATGTGGGCGGTGGCGGCACCAGGTCCGAGCAGTGGAGCGAGTAACACGTTTTGGATGTTGCCGGTGACAGCAGGTTCCGGCGGGGGAAATGTAGGGAATTCTTCCGGAGGAGGCGGCGGCGGCGGCGGCGGTATTGGTGGTGGGGGATTGGAAGCTCATCAGATGTGGCCATTTTCGACGAGTGGTAACACATTGCAGGCGCCGTTGCATTTGATGCCGAGATTTAATATACCTGGAGGTGTGGAAATTCAGGCAGCAGCGGCGGCGGCAGGAGGAGGAAGAGGCGGCGGTGGGCAATTGCAATTGGGTTCGATGTTGATGCAACAAGCAGCGGGAGGCAGCGGTGGTGGCTTGGGGGTATCGGAGACGAATTTGGGAATGCTGGCTGCTCTTAATGCTGCTTATAATTCAAGATCGGGAAGTGGTTTCAATATTAATTCTGATAATCATCCATTGGATCATCAGCATCATCAGCATCATCATCATCATCATCATCATCATCCAGCTCATAATACTAATACTGATCATAATAGTGGAGATGAAGCTCCAAACACTTCCCAATGA | 1338 | 51.42 | MASTSASSASTHHLDASLVIATRSDTTAAADPSPRSTSTANAANKRSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSSLNISIRSSGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGFHHQQQQQQQHQLNLMTADQIGEGLPSGGGESTDNYMRKRFREDLFKEDTQSPGESSGGGGSPKAMKTDLQLEKQQQQQQQPSASSSGLLRPGAAMWAVAAPGPSSGASNTFWMLPVTAGSGGGNVGNSSGGGGGGGGGIGGGGLEAHQMWPFSTSGNTLQAPLHLMPRFNIPGGVEIQAAAAAAGGGRGGGGQLQLGSMLMQQAAGGSGGGLGVSETNLGMLAALNAAYNSRSGSGFNINSDNHPLDHQHHQHHHHHHHHHPAHNTNTDHNSGDEAPNTSQ* | 446 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 13690054 | 13691391 | - | Chy10G179430.1 | Chy10g00749 | 235124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 208 | 253 | - | - | |
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 232 | 251 | - | - | |
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 45 | 59 | - | - | |
Chy10g00749 | 445 | Pfam | TCP family transcription factor | 47 | 179 | IPR017887 | - | |
Chy10g00749 | 445 | PANTHER | TRANSCRIPTION FACTOR TCP8 | 3 | 445 | - | - | |
Chy10g00749 | 445 | ProSiteProfiles | TCP domain profile. | 48 | 102 | IPR017887 | - | |
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 413 | 428 | - | - | |
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 400 | 445 | - | - | |
Chy10g00749 | 445 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 3 | 445 | IPR005333 | GO:0003700 | |
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 24 | 59 | - | - | |
Chy10g00749 | 445 | MobiDBLite | consensus disorder prediction | 24 | 44 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02504 | Chy-Chr2:28485684 | Chy10g00749 | Chy-Chr10:13690054 | 2.00E-46 | dispersed | |
Chy06g00901 | Chy-Chr6:6586978 | Chy10g00749 | Chy-Chr10:13690054 | 3.58E-33 | dispersed | |
Chy10g00651 | Chy-Chr10:13031263 | Chy10g00749 | Chy-Chr10:13690054 | 2.14E-39 | dispersed | |
Chy10g00749 | Chy-Chr10:13690054 | Chy12g01554 | Chy-Chr12:19166908 | 5.37E-44 | dispersed | |
Chy10g00749 | Chy-Chr10:13690054 | Chy10g00992 | Chy-Chr10:15398882 | 3.40E-44 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18594 | PF03634 | TCP | 8.30E-39 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy10g00749 | - | - | csv:101222378 | 664.07 |