Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00774 ATGCCAATCTCACCCTCAAGAACTCTACAAGTTTCTCATTCACAAAGCATGATACAACCTTTCTCAAATCTTCTTTTAAGTAGAGGGAAGTTGACGCCTGCAGAAAACTACTATTCTGCCATGGCTACTCGCAACCAAGATTCGGTACAAGACGAGGAACACATTTTCTGCAGCCAACTTCCTGAGGTCCAAGTGCCTTATGATATCACACTGCCTGAGTTTGTACTCCAGAATGCTGAATCATATGCCGAAAATGTGGCATTCGTGGAAGCCATGAGCGGGAAGGAATACACTTACCGTGAAGTTTTAAGAGACACAAATAGATTTTCCAAGGCCTTGCGCTCTCTGAGGTTGAAGAAAGGACATGTGGTTATTGTTGTTCTACCTAATGTTGCTGAATACGCCATTGTTGCTTTAGGGATAATGGCTGCTGGAGGTGTGTTTTCAGGTGTGAATCCGGCAGCTCACATATCAGAAATCAAAAAGCAAGTGGAGGTAGCAGAAGCCAAACTTGTCGTCACAAATGCTGCAAACTTTGAAAAGGTGAGGGAATTAAAGCTACCAGTCATCTTATTAGAGGAAGAACTAATGGAAGGTGCCATGAATTGGCACAAACTTCTTGAAGCAGCAGATCGTGCAGGGAACAATTTTGTTAAAGAGGAGATTAAGCAAACTGATTTATGTGCACTTCCTTTCTCATCAGGAACCACAGGAGTTTCCAAAGGTGTTATGTTAACTCACCGAAATCTCGTAGCTAATATGTGTTCGACTCTCTCTGGTGTCCCGCAAGAAATGGAGGGCAAGGTCACGACGCTAGGCCTCATTCCATTCTTCCATATTTATGGGATCACTGGAATATGTTGTTCTACACTTAGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTCAGGACTTTCATTAATGCTCTCATAACACATGAGATCACATTTGCTCCAATTGTTCCTCCTATTATACTGGCTTTGGTTAAGAATCCCATTGTGGAAGAATTTGATCTTAGCAGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCACTCGCACCCGAACTTCAAACTGCCTTCGAGAGAAAATTCCCCGGTGTGGACGTTCAAGAGGCATATGGACTTACTGAGCACTGTTGCATCACTCTTAACTATGGAAATATAGGGAAAGAGAATCTCAGTGCAAAGAAAAACACAGTTGGCCGTATTCTTCCTAATCTAGAAGTCAAATTCATCGACCCAGACACTGGAAGGTCTCTGCCCAAGAACACTCCGGGTGAAATCTGTGTAAGAAGCCAATGTGTGATGCAAGGCTACTACAAAAACGAAGAGGAGACTTCGAGGACGATCGATACCAAAGGCTGGATGCACACTGGGGATATTGGATACATCGATGACGATGGCAACGTGTTTATTGTGGATCGTATCAAGGAATTGATCAAGTACAAAGGATTTCAAGTTGCTCCGGCTGAGTTAGAGGCAATCCTTCTAACTCATCCCTCCATTGAAGATGCAGCTGTGGTGCCGTTGCCAGATGAAGAAGCCGGTGAGATCCCAGCAGCAAGCGTTGTGATGGCTCCGAACTCAAAAGAAACCGAAGAAGATATAATCAAACATGTTGCCTCAAATGTTGCACATTACAAGAAAGTTAGACTCGTTCATTTTGTAGACACTATCCCAAAGTCGCCTTCTGGGAAAGTTATGAGAAGGTTGATCAAAGAGAAGATGATCGAAAAGATTCGAGCTGATGAATCCGCTAGATTTATCTTCTAA 1785 43.25 MPISPSRTLQVSHSQSMIQPFSNLLLSRGKLTPAENYYSAMATRNQDSVQDEEHIFCSQLPEVQVPYDITLPEFVLQNAESYAENVAFVEAMSGKEYTYREVLRDTNRFSKALRSLRLKKGHVVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIKKQVEVAEAKLVVTNAANFEKVRELKLPVILLEEELMEGAMNWHKLLEAADRAGNNFVKEEIKQTDLCALPFSSGTTGVSKGVMLTHRNLVANMCSTLSGVPQEMEGKVTTLGLIPFFHIYGITGICCSTLRNKGKVVVMGRFDLRTFINALITHEITFAPIVPPIILALVKNPIVEEFDLSSLKLQAIMTAAAPLAPELQTAFERKFPGVDVQEAYGLTEHCCITLNYGNIGKENLSAKKNTVGRILPNLEVKFIDPDTGRSLPKNTPGEICVRSQCVMQGYYKNEEETSRTIDTKGWMHTGDIGYIDDDGNVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDEEAGEIPAASVVMAPNSKETEEDIIKHVASNVAHYKKVRLVHFVDTIPKSPSGKVMRRLIKEKMIEKIRADESARFIF* 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13818401 13820821 + Chy10G179680.1 Chy10g00774 235149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00774 594 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 47 583 - -
Chy10g00774 594 CDD 4CL 65 574 - -
Chy10g00774 594 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Chy10g00774 594 Pfam AMP-binding enzyme C-terminal domain 495 570 IPR025110 -
Chy10g00774 594 Gene3D - 482 584 IPR045851 -
Chy10g00774 594 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 47 583 - -
Chy10g00774 594 SUPERFAMILY Acetyl-CoA synthetase-like 52 583 - -
Chy10g00774 594 Gene3D - 53 481 IPR042099 -
Chy10g00774 594 Pfam AMP-binding enzyme 77 486 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00951 Chy-Chr5:14103681 Chy10g00774 Chy-Chr10:13818401 1.54E-134 dispersed
Chy07g00384 Chy-Chr7:3075933 Chy10g00774 Chy-Chr10:13818401 1.29E-45 dispersed
Chy07g00385 Chy-Chr7:3083401 Chy10g00774 Chy-Chr10:13818401 8.90E-49 dispersed
Chy10g00774 Chy-Chr10:13818401 Chy12g00816 Chy-Chr12:13246391 9.65E-132 dispersed
Chy10g00774 Chy-Chr10:13818401 Chy02g02216 Chy-Chr2:26272015 4.46E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00774 K01904 - csv:101220731 1161.36