Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy10g00792 ATGGATCCCAGGGTTTTAGCCCTCTCACCGGATGGTCTCTCGCTTCTTTCTCTCAAGTCAGCGGTCGACCAGTCGCCGGATTCCTCTGTTTTCTCCGATTGGAACGAGAATGACTCTACGCCATGCCAATGGTCTGGCATTTCTTGCATGAATGTTTCTGGTGACTCGCGTGTCGTTGGAATTGCTCTTTCTGGTAAGAATCTTCGTGGCTACATTCCTTCTGAACTTGGTTCGCTTGTGTATCTACGCCGATTGAACCTTCATAACAACAATCTCTACGGTTCCATACCTGAACAGCTGTTTAATGCTACCTCATTGCACAGCCTGTTTCTCTACAGTAATAATCTCTCCGGTCCTTTTCCTCCTTCGATCTGCAATATTCCGAGGCTTCAAAACCTCGATCTCTCCAACAATTCCCTTGCTGGACCAGTCCCCGACGAATTGAGAAATTGTAAGCAATTGCAGCGATTAATACTCGCTAGAAACCAATTCGATGGAGAAATTCCGTCTGGTGTTTGGTCTGGGATGGATAATTTAGTTCAACTCGATCTCTCTTCCAATGATTTCAGTGGATCAATTCCGGAGGATCTAGGGGAACTGAAGACACTCTCCGGTACGCTCAACCTCTCCTTCAATCATTTATCGGGTAAAATCCCGAAAACTCTTGGAGATTTGCCAGTGACGGTGAGTTTCGACCTCCGGAACAACAACTTGAGCGGAAGTATACCTCAAACGGGTTCGTTTGCGAATCAGGGACCGACTGCATTTCTCAACAATCCCGAGCTATGCGGATTTCCTCTTCAGAAATCTTGTGAGAATTCGGAACGTGGCTCACCGGGAAATTCCGATTCTAAACCATCTTACATTACCCCTAGAAAAGGATTGAGCGCCGGACTAATCATTCTCATCTCCGCAGCCGACGCCGCCGGAGTAGCGTTCATCGGCCTGGTAATAGTTTACGTATACTGGCGACGGAAGGACAGTTCAAACGGCTGTAGCTGTACGTCGAAGAGAAAATTCGGCGGAAATCAGAAAGACAGTCTCTGCAACTTTCCTTGTATGAATGGGAATGATAAGAACGAGGAATCTGAAATGGAGGAACCGGAGAACAGTGACAGAAGCAGAGAGGAAGGAGGGCTTGTAGCCGTAGACAAAGGGTTTACGTTCGAGCTCGATGAGCTGTTGAGAGCGTCAGCGTATGTGCTGGGAAAGAGTGGACTGGGAATTGTGTACAAAGTGGTACTCGGAAATGGGATTCCGGTGGCTGTACGGCGGTTGGGGGAAGGGGGAGAACAGAGGTATAAAGAGTTCGCGGCGGAGGTACAGGCCATCGGAAGGGTAAAACATCCAAATATCGTGAAATTGAGAGCTTACTATTGGGCTCCGGATGAGAAGCTTCTGATCAGTGATTTTATCTCCAATGGAAACTTGGCCTCTGCTCTTCGCGGAAAAAACGGGCAGCCATCTTCAAGCCTTTCATGGTCAACAAGACTACGAATAACCAAAGGAACCGCACGAGGATTAGCCTATCTCCATGAATGCAGCCCAAGAAAATTCGTCCATGGCGACATCAAACCTTCCAACATCCTCCTCGACAACGATTTCCATCCCCACATCTCCGACTTCGGCCTCAACCGTTTAATCAGCATCACCGGCAACAACCCCTCCTCCTCCGGCGGCCTCATCGGCGGCGCCTTCTCCTACCTCAAATCCGTCCAAACCGACCGCACCAACAACTACTGTGCGCCGGAGGCCCGAGCCCCAGGCGGCCGCCCCACCCAAAAATGGGACGTATATTCCTTCGGCGTCATGGTCCTCGAATTACTCACCGGAAAGTCCCCGGAGCTTTCGCCGAACACGTCGACTTCTTTGGAAATTCCAGATTTGGTGAGATGGGTTAGGAAAGGATTTGAAGAAGCAAAGCCATTGTCGGATTTGGTTGATCCTACTCTGTTACAAGAAGTACATGCTAAGAAAGAAGTGCTCGCCGTATTCCACGTTGCGCTCGCTTGTACAGAGAGCGATCCGGAGGTTCGGCCCAGAATGAAGACAGTGTCGGAGAGTTTTGATAGGATTGGATCGTGA 2085 49.4 MDPRVLALSPDGLSLLSLKSAVDQSPDSSVFSDWNENDSTPCQWSGISCMNVSGDSRVVGIALSGKNLRGYIPSELGSLVYLRRLNLHNNNLYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSLAGPVPDELRNCKQLQRLILARNQFDGEIPSGVWSGMDNLVQLDLSSNDFSGSIPEDLGELKTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRNNNLSGSIPQTGSFANQGPTAFLNNPELCGFPLQKSCENSERGSPGNSDSKPSYITPRKGLSAGLIILISAADAAGVAFIGLVIVYVYWRRKDSSNGCSCTSKRKFGGNQKDSLCNFPCMNGNDKNEESEMEEPENSDRSREEGGLVAVDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGKNGQPSSSLSWSTRLRITKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTDRTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSDLVDPTLLQEVHAKKEVLAVFHVALACTESDPEVRPRMKTVSESFDRIGS* 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13971417 13982653 - Chy10G179860.1 Chy10g00792 235167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy10g00792 694 Pfam Protein kinase domain 401 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00792 694 SMART serkin_6 400 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00792 694 SMART LRR_typ_2 176 200 IPR003591 -
Chy10g00792 694 SMART LRR_typ_2 79 103 IPR003591 -
Chy10g00792 694 SMART LRR_typ_2 152 175 IPR003591 -
Chy10g00792 694 SMART LRR_typ_2 127 151 IPR003591 -
Chy10g00792 694 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 693 - -
Chy10g00792 694 Gene3D Transferase(Phosphotransferase) domain 1 472 694 - -
Chy10g00792 694 Gene3D Ribonuclease Inhibitor 9 177 IPR032675 -
Chy10g00792 694 CDD STKc_IRAK 402 692 - -
Chy10g00792 694 Pfam Leucine rich repeat 82 140 IPR001611 GO:0005515
Chy10g00792 694 ProSiteProfiles Protein kinase domain profile. 396 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy10g00792 694 SUPERFAMILY L domain-like 14 268 - -
Chy10g00792 694 Pfam Leucine rich repeat N-terminal domain 9 49 IPR013210 -
Chy10g00792 694 Gene3D Phosphorylase Kinase; domain 1 388 471 - -
Chy10g00792 694 SUPERFAMILY Protein kinase-like (PK-like) 401 686 IPR011009 -
Chy10g00792 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Chy10g00792 694 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 7 693 - -
Chy10g00792 694 Gene3D Ribonuclease Inhibitor 178 269 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy08g00173 Chy-Chr8:3915067 Chy10g00792 Chy-Chr10:13971417 1.00E-168 dispersed
Chy09g00971 Chy-Chr9:12416217 Chy10g00792 Chy-Chr10:13971417 2.18E-70 dispersed
Chy10g00792 Chy-Chr10:13971417 Chy10g01174 Chy-Chr10:16557729 0 dispersed
Chy10g00792 Chy-Chr10:13971417 Chy09g00887 Chy-Chr9:11643862 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71506 PF00069 Pkinase 1.10E-32 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy10g00792 - - csv:101220493 1370.53